RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TANGO6Q9C0B7 1094 aa25.66■■□□□ 1.7
PPP4R1-228ENST00000584074 SPDYE16A6NNV3 312 aaPredicted RBP25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 RASA1P20936 1047 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 ATP2B2Q01814 1243 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 LBX2Q6XYB7 198 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 SPICE1Q8N0Z3 855 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 EVI5LQ96CN4 794 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 SH2D4AQ9H788 454 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 KANSL2Q9H9L4 492 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 MKNK2Q9HBH9 465 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 BTBD7Q9P203 1132 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 ROBO3Q96MS0 1386 aa25.65■■□□□ 1.7
PPP4R1-228ENST00000584074 CYP2B6P20813 491 aa25.64■■□□□ 1.7
PPP4R1-228ENST00000584074 LPAR1Q92633 364 aa25.64■■□□□ 1.7
PPP4R1-228ENST00000584074 VCPKMTQ9H867 229 aa25.64■■□□□ 1.7
PPP4R1-228ENST00000584074 GJA8P48165 433 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 COG2Q14746 738 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 CCDC129Q6ZRS4 1044 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 GPR142Q7Z601 462 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 NUDT12Q9BQG2 462 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 NACAP1Q9BZK3 213 aa25.63■■□□□ 1.69
PPP4R1-228ENST00000584074 PRPF38BQ5VTL8 546 aaKnown RBP25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 PLEKHH3Q7Z736 793 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 NKX2-3Q8TAU0 364 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 SOCS4Q8WXH5 440 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 HOXC10Q9NYD6 342 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 DOCK3Q8IZD9 2030 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 MYH8P13535 1937 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 PDE4DIPQ5VU43 2346 aa25.62■■□□□ 1.69
PPP4R1-228ENST00000584074 PRDM1O75626 825 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 HMGCRP04035 888 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 CCNA1P78396 465 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 TRIM32Q13049 653 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 MORN1Q5T089 497 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 CHD1LQ86WJ1 897 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 U2AF1L4Q8WU68 220 aaKnown RBP25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 USP6NLQ92738 828 aa25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 CWC22Q9HCG8 908 aaKnown RBP25.61■■□□□ 1.69
PPP4R1-228ENST00000584074 FOXP2O15409 715 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 NUCB1Q02818 461 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 WDR78Q5VTH9 848 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 TRIB2Q92519 343 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 DEFB118Q96PH6 123 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 NAPBQ9H115 298 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 PLXNB2O15031 1838 aa25.6■■□□□ 1.69
PPP4R1-228ENST00000584074 WDR46O15213 610 aaKnown RBP25.59■■□□□ 1.69
PPP4R1-228ENST00000584074 FLOT1O75955 427 aa25.59■■□□□ 1.69
PPP4R1-228ENST00000584074 SGPL1O95470 568 aa25.59■■□□□ 1.69
PPP4R1-228ENST00000584074 XRCC5P13010 732 aaKnown RBP25.59■■□□□ 1.69
PPP4R1-228ENST00000584074 PAK6Q9NQU5 681 aaPredicted RBP25.59■■□□□ 1.69
PPP4R1-228ENST00000584074 DSG3P32926 999 aa25.58■■□□□ 1.69
PPP4R1-228ENST00000584074 SAMD1Q6SPF0 538 aaPredicted RBP25.58■■□□□ 1.69
PPP4R1-228ENST00000584074 ZNF444Q8N0Y2 327 aaPredicted RBP25.58■■□□□ 1.69
PPP4R1-228ENST00000584074 ZNF287Q9HBT7 754 aa25.58■■□□□ 1.69
PPP4R1-228ENST00000584074 GOPCQ9HD26 462 aa25.58■■□□□ 1.69
PPP4R1-228ENST00000584074 RAD21O60216 631 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 RGS2P41220 211 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 PPARAQ07869 468 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 VPS53Q5VIR6 699 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 ATG4CQ96DT6 458 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 FAM227BQ96M60 508 aa25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 MOV10L1Q9BXT6 1211 aaKnown RBP25.57■■□□□ 1.68
PPP4R1-228ENST00000584074 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.57■■□□□ 1.681e-10■■■■■ 31.6
PPP4R1-228ENST00000584074 IGKV6D-41A0A0C4DH26 115 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 TRIM6-TRIM34B2RNG4 842 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 IRX6P78412 446 aaPredicted RBP25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 CCL14Q16627 93 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 PLEKHM2Q8IWE5 1019 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 SPATC1LQ9H0A9 340 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 HELLSQ9NRZ9 838 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 FBXO28Q9NVF7 368 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 NYAP2Q9P242 653 aa25.56■■□□□ 1.68
PPP4R1-228ENST00000584074 A0A0D9SFI3 127 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 TFRCP02786 760 aaKnown RBP25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 ZKSCAN1P17029 563 aaPredicted RBP25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 PTPREP23469 700 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 MAP2K5Q13163 448 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 UBE2Q1Q7Z7E8 422 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 RILPL2Q969X0 211 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 APBA2Q99767 749 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 RPTORQ8N122 1335 aa25.55■■□□□ 1.68
PPP4R1-228ENST00000584074 SLC15A5A6NIM6 579 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 SLC3A2P08195 630 aaKnown RBP25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 PDE4BQ07343 736 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 FAM83BQ5T0W9 1011 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 TRMT44Q8IYL2 757 aaKnown RBP25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 MB21D1Q8N884 522 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 NUP88Q99567 741 aaPredicted RBP25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 CLIP2Q9UDT6 1046 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 IVNS1ABPQ9Y6Y0 642 aa25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 GREB1LQ9C091 1923 aaPredicted RBP25.54■■□□□ 1.68
PPP4R1-228ENST00000584074 RLFQ13129 1914 aa25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 PRKAR2AP13861 404 aaKnown RBP25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 NMIQ13287 307 aaPredicted RBP25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 PLS1Q14651 629 aa25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 FAM47AQ5JRC9 791 aa25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 MAP3K21Q5TCX8 1036 aa25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 CEP95Q96GE4 821 aa25.53■■□□□ 1.68
PPP4R1-228ENST00000584074 CRISPLD2Q9H0B8 497 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms