RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 FEZ1Q99689 392 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
GGA3-209ENST00000580646 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
GGA3-209ENST00000580646 GUCY1A2P33402 732 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 FLT3LGP49771 235 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 USP14P54578 494 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 HERVK_113P62684 666 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 SEPT2Q15019 361 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
GGA3-209ENST00000580646 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 COA7Q96BR5 231 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 C12orf42Q96LP6 360 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 LSG1Q9H089 658 aaKnown RBP11.72□□□□□ -0.53
GGA3-209ENST00000580646 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 MORF4L1Q9UBU8 362 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
GGA3-209ENST00000580646 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
GGA3-209ENST00000580646 ZSWIM8A7E2V4 1837 aa11.72□□□□□ -0.53
GGA3-209ENST00000580646 SMIM22K7EJ46 135 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 ZNF213O14771 459 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 ORC4O43929 436 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 RASA1P20936 1047 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 PTH1RQ03431 593 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 IRF5Q13568 498 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 MTFR1Q15390 333 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 ZYXQ15942 572 aaKnown RBP11.71□□□□□ -0.53
GGA3-209ENST00000580646 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.53
GGA3-209ENST00000580646 MKNK2Q9HBH9 465 aa11.71□□□□□ -0.53
GGA3-209ENST00000580646 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
GGA3-209ENST00000580646 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.54
GGA3-209ENST00000580646 SZT2Q5T011 3432 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 ADCY3O60266 1144 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 REC8O95072 547 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 UBXN2AP68543 259 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 AKNAD1Q5T1N1 836 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 ZNF444Q8N0Y2 327 aaPredicted RBP11.7□□□□□ -0.54
GGA3-209ENST00000580646 GPRC5AQ8NFJ5 357 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
GGA3-209ENST00000580646 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 RBPJLQ9UBG7 517 aa11.7□□□□□ -0.54
GGA3-209ENST00000580646 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 PEX10O60683 326 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 AKR1B1P15121 316 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 ELNP15502 786 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 VCAM1P19320 739 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 NECTIN1Q15223 517 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 Q3C1V9 767 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 CATSPERGQ6ZRH7 1159 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 MFSD6Q6ZSS7 791 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 NEDD1Q8NHV4 660 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 SYNPO2Q9UMS6 1093 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
GGA3-209ENST00000580646 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
GGA3-209ENST00000580646 IGKV6D-41A0A0C4DH26 115 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 CYP21A2P08686 494 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 CCL5P13501 91 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 FXR1P51114 621 aaKnown RBP eCLIP11.68□□□□□ -0.54
GGA3-209ENST00000580646 ERVK-9P63128 1117 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 ERVK-24P63145 666 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 KRT23Q9C075 422 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
GGA3-209ENST00000580646 KANSL2Q9H9L4 492 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 RABGAP1Q9Y3P9 1069 aa11.68□□□□□ -0.54
GGA3-209ENST00000580646 INHAP05111 366 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 GJB1P08034 283 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 TSPY3P0CV98 308 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 TSPY8P0CW00 308 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 MAPK4P31152 587 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 NOVP48745 357 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 HAND2P61296 217 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 ICA1Q05084 483 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 TSGA10IPQ3SY00 556 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 TBC1D10CQ8IV04 446 aa11.67□□□□□ -0.54
GGA3-209ENST00000580646 CCAR1Q8IX12 1150 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms