RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
ABR-223ENST00000573895 RLFQ13129 1914 aa17.09■□□□□ 0.33
ABR-223ENST00000573895 GRK4P32298 578 aa17.08■□□□□ 0.32
ABR-223ENST00000573895 C8orf34Q49A92 452 aa17.08■□□□□ 0.32
ABR-223ENST00000573895 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
ABR-223ENST00000573895 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
ABR-223ENST00000573895 NAPBQ9H115 298 aa17.08■□□□□ 0.32
ABR-223ENST00000573895 PARP14Q460N5 1801 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
ABR-223ENST00000573895 RASA1P20936 1047 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 ERVK-24P63145 666 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 ALX1Q15699 326 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 MCMDC2Q4G0Z9 681 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
ABR-223ENST00000573895 VCPKMTQ9H867 229 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 TXNRD2Q9NNW7 524 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 DIAPH3Q9NSV4 1193 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 GABRQQ9UN88 632 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
ABR-223ENST00000573895 PLXNB2O15031 1838 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
ABR-223ENST00000573895 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
ABR-223ENST00000573895 MAPK4P31152 587 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 FLT3LGP49771 235 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 PDE4BQ07343 736 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 COG2Q14746 738 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
ABR-223ENST00000573895 SH3TC2Q8TF17 1288 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
ABR-223ENST00000573895 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
ABR-223ENST00000573895 WDR46O15213 610 aaKnown RBP17.05■□□□□ 0.32
ABR-223ENST00000573895 FOXP2O15409 715 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 CCNA1P78396 465 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 PPARAQ07869 468 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 GJD2Q9UKL4 321 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
ABR-223ENST00000573895 MKI67P46013 3256 aaKnown RBP17.05■□□□□ 0.32
ABR-223ENST00000573895 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 IGKV6D-41A0A0C4DH26 115 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 A0A0D9SFI3 127 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 SPDYE16A6NNV3 312 aaPredicted RBP17.04■□□□□ 0.32
ABR-223ENST00000573895 ADCY3O60266 1144 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 MFAP1P55081 439 aaKnown RBP17.04■□□□□ 0.32
ABR-223ENST00000573895 UBXN2AP68543 259 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 Q3C1V9 767 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
ABR-223ENST00000573895 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 CNMDO75829 334 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 CAPN2P17655 700 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 NMIQ13287 307 aaPredicted RBP17.03■□□□□ 0.32
ABR-223ENST00000573895 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 SOCS4Q8WXH5 440 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 MKL1Q969V6 931 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
ABR-223ENST00000573895 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 RAD50Q92878 1312 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
ABR-223ENST00000573895 REC8O95072 547 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 FGRP09769 529 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 HSPD1P10809 573 aaKnown RBP17.02■□□□□ 0.32
ABR-223ENST00000573895 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
ABR-223ENST00000573895 DSG3P32926 999 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 PPP4R3BQ5MIZ7 849 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 VPS53Q5VIR6 699 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
ABR-223ENST00000573895 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.32
ABR-223ENST00000573895 NEDD1Q8NHV4 660 aa17.02■□□□□ 0.32
ABR-223ENST00000573895 SGSM2O43147 1006 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 PRDM1O75626 825 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 FGAP02671 866 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 GPR142Q7Z601 462 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 PLEKHH3Q7Z736 793 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 TRMT44Q8IYL2 757 aaKnown RBP17.01■□□□□ 0.31
ABR-223ENST00000573895 STK11IPQ8N1F8 1099 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 NKX2-3Q8TAU0 364 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 NUDT12Q9BQG2 462 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 PORCNQ9H237 461 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
ABR-223ENST00000573895 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
ABR-223ENST00000573895 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
ABR-223ENST00000573895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABR-223ENST00000573895 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
ABR-223ENST00000573895 PEX10O60683 326 aa17■□□□□ 0.31
ABR-223ENST00000573895 FLOT1O75955 427 aa17■□□□□ 0.31
ABR-223ENST00000573895 TTLL1O95922 423 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms