RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RRAGBQ5VZM2 374 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 ENAHQ8N8S7 591 aaPredicted RBP19.78■□□□□ 0.76
SCARF1-205ENST00000571272 ESR2Q92731 530 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 ABCB6Q9NP58 842 aa19.78■□□□□ 0.76
SCARF1-205ENST00000571272 PTGDRQ13258 359 aa19.77■□□□□ 0.76
SCARF1-205ENST00000571272 NUP88Q99567 741 aaPredicted RBP19.77■□□□□ 0.76
SCARF1-205ENST00000571272 TAB2Q9NYJ8 693 aa19.77■□□□□ 0.76
SCARF1-205ENST00000571272 MAPK8IP1Q9UQF2 711 aa19.77■□□□□ 0.76
SCARF1-205ENST00000571272 ZSCAN26Q16670 478 aa19.77■□□□□ 0.76
SCARF1-205ENST00000571272 VPS18Q9P253 973 aa19.77■□□□□ 0.76
SCARF1-205ENST00000571272 TULP2O00295 520 aa19.77■□□□□ 0.75
SCARF1-205ENST00000571272 FERMT2Q96AC1 680 aa19.77■□□□□ 0.75
SCARF1-205ENST00000571272 SLF1Q9BQI6 1058 aa19.77■□□□□ 0.75
SCARF1-205ENST00000571272 TOGARAM1Q9Y4F4 1720 aa19.77■□□□□ 0.75
SCARF1-205ENST00000571272 MYH8P13535 1937 aa19.77■□□□□ 0.75
SCARF1-205ENST00000571272 XDHP47989 1333 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 MYH6P13533 1939 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 N4BP1O75113 896 aaKnown RBP19.76■□□□□ 0.75
SCARF1-205ENST00000571272 CT47A1Q5JQC4 288 aaPredicted RBP19.76■□□□□ 0.75
SCARF1-205ENST00000571272 TTC38Q5R3I4 469 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 BBXQ8WY36 941 aaPredicted RBP19.76■□□□□ 0.75
SCARF1-205ENST00000571272 TTF2Q9UNY4 1162 aaKnown RBP19.76■□□□□ 0.75
SCARF1-205ENST00000571272 FUT2Q10981 343 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 IFIT1BQ5T764 474 aaKnown RBP19.76■□□□□ 0.75
SCARF1-205ENST00000571272 SUSD4Q5VX71 490 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 AK7Q96M32 723 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 ABHD10Q9NUJ1 306 aa19.76■□□□□ 0.75
SCARF1-205ENST00000571272 HDXQ7Z353 690 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 ZSCAN10Q96SZ4 725 aaPredicted RBP19.75■□□□□ 0.75
SCARF1-205ENST00000571272 NAPGQ99747 312 aaPredicted RBP19.75■□□□□ 0.75
SCARF1-205ENST00000571272 SOS2Q07890 1332 aaPredicted RBP19.75■□□□□ 0.75
SCARF1-205ENST00000571272 SHANK3Q9BYB0 1731 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 DCCP43146 1447 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 RCAN1P53805 252 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 VSNL1P62760 191 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 CATIPQ7Z7H3 387 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 TMTC1Q8IUR5 882 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
SCARF1-205ENST00000571272 PRPF3O43395 683 aaKnown RBP19.74■□□□□ 0.75
SCARF1-205ENST00000571272 ZNF34Q8IZ26 560 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 MSANTD4Q8NCY6 345 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 HNRNPLLQ8WVV9 542 aaKnown RBP19.74■□□□□ 0.75
SCARF1-205ENST00000571272 MTA3Q9BTC8 594 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 RAB21Q9UL25 225 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 TIAM2Q8IVF5 1701 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 CTAGE15A4D2H0 777 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 SEMA3EO15041 775 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 CTAGE8P0CG41 777 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 KRT9P35527 623 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 COPB1P53618 953 aaKnown RBP19.74■□□□□ 0.75
SCARF1-205ENST00000571272 CTAGE6Q86UF2 777 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 CTAGE4Q8IX94 777 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 NOA1Q8NC60 698 aaKnown RBP19.74■□□□□ 0.75
SCARF1-205ENST00000571272 EXOC4Q96A65 974 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 MTRQ99707 1265 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 BRMS1Q9HCU9 246 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 L1RE1Q9UN81 338 aa19.74■□□□□ 0.75
SCARF1-205ENST00000571272 MAGEB6P1A0A0J9YX57 407 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 ERLIN1O75477 346 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 MCM7P33993 719 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 ARHGAP25P42331 645 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 NCAPH2Q6IBW4 605 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 CCDC51Q96ER9 411 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 CHP1Q99653 195 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 TRIM10Q9UDY6 481 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 NPY5RQ15761 445 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 PIK3AP1Q6ZUJ8 805 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 IQUBQ8NA54 791 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 MYH2Q9UKX2 1941 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
SCARF1-205ENST00000571272 POTEB2H3BUK9 544 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 USP5P45974 858 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 DYNLL1P63167 89 aaKnown RBP19.73■□□□□ 0.75
SCARF1-205ENST00000571272 CYP26C1Q6V0L0 522 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 NELFBQ8WX92 580 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
SCARF1-205ENST00000571272 LIMA1Q9UHB6 759 aaKnown RBP19.73■□□□□ 0.75
SCARF1-205ENST00000571272 GUCA1BQ9UMX6 200 aa19.73■□□□□ 0.75
SCARF1-205ENST00000571272 ITIH6Q6UXX5 1313 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 ADAMTS3O15072 1205 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 PHACTR2O75167 634 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-205ENST00000571272 ATP2C1P98194 919 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-205ENST00000571272 PAK1Q13153 545 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 E2F4Q16254 413 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 MUM1L1Q5H9M0 696 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 ZFP91Q96JP5 570 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-205ENST00000571272 GDAQ9Y2T3 454 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 KCNJ18B7U540 433 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 BMP15O95972 392 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 GTF2E1P29083 439 aaPredicted RBP19.72■□□□□ 0.75
SCARF1-205ENST00000571272 EVX2Q03828 476 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 TROAPQ12815 778 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 KCNJ12Q14500 433 aa19.72■□□□□ 0.75
SCARF1-205ENST00000571272 PES1O00541 588 aaKnown RBP19.71■□□□□ 0.75
SCARF1-205ENST00000571272 IGHMBP2P38935 993 aaKnown RBP19.71■□□□□ 0.75
SCARF1-205ENST00000571272 UBXN1Q04323 297 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
SCARF1-205ENST00000571272 PPP2R5BQ15173 497 aa19.71■□□□□ 0.75
SCARF1-205ENST00000571272 IL17AQ16552 155 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms