RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	RCSD1	Q6JBY9	416 aa		29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	GPAT2	Q6NUI2	795 aa		29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	SPICE1	Q8N0Z3	855 aa		29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	PROCA1	Q8NCQ7	364 aa	Predicted RBP	29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	C12orf42	Q96LP6	360 aa		29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	VCPKMT	Q9H867	229 aa		29.22	■■■□□ 2.27
RBBP6-211	ENST00000568316	PRC1	O43663	620 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	MCM5	P33992	734 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	NOV	P48745	357 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	ENAH	Q8N8S7	591 aa	Predicted RBP	29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	MKL1	Q969V6	931 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	GOPC	Q9HD26	462 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	AGTPBP1	Q9UPW5	1226 aa		29.21	■■■□□ 2.27
RBBP6-211	ENST00000568316	IFIT3	O14879	490 aa	Known RBP	29.2	■■■□□ 2.26
RBBP6-211	ENST00000568316	VCAM1	P19320	739 aa		29.2	■■■□□ 2.26
RBBP6-211	ENST00000568316	CCDC178	Q5BJE1	867 aa		29.2	■■■□□ 2.26
RBBP6-211	ENST00000568316	ANKRD23	Q86SG2	305 aa		29.2	■■■□□ 2.26
RBBP6-211	ENST00000568316	TMEM47	Q9BQJ4	181 aa		29.2	■■■□□ 2.26
RBBP6-211	ENST00000568316	TOP1	P11387	765 aa	Known RBP	29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	CPA1	P15085	419 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	MAP2K1	Q02750	393 aa	Predicted RBP	29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	OTUD7B	Q6GQQ9	843 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	DGKH	Q86XP1	1220 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	CHMP4C	Q96CF2	233 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	TTC14	Q96N46	770 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316	MTMR7	Q9Y216	660 aa		29.19	■■■□□ 2.26
RBBP6-211	ENST00000568316		F5H6K3	240 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	PDHX	O00330	501 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	NDUFB10	O96000	172 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	KLRC3	Q07444	240 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	SEC23A	Q15436	765 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	TMEM67	Q5HYA8	995 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	JMY	Q8N9B5	988 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	LPAR1	Q92633	364 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	TCEANC2	Q96MN5	208 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	SYNPO2	Q9UMS6	1093 aa		29.18	■■■□□ 2.26
RBBP6-211	ENST00000568316	ERICH2	A1L162	156 aa		29.17	■■■□□ 2.26
RBBP6-211	ENST00000568316	SART3	Q15020	963 aa	Known RBP	29.17	■■■□□ 2.26
RBBP6-211	ENST00000568316	LRRC2	Q9BYS8	371 aa		29.17	■■■□□ 2.26
RBBP6-211	ENST00000568316	RPAP3	Q9H6T3	665 aa	Predicted RBP	29.17	■■■□□ 2.26
RBBP6-211	ENST00000568316	GPHN	Q9NQX3	736 aa	Predicted RBP	29.17	■■■□□ 2.26
RBBP6-211	ENST00000568316	CAST	P20810	708 aa	Known RBP	29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	PSMA5	P28066	241 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	IFIT1B	Q5T764	474 aa	Known RBP	29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	SLFN13	Q68D06	897 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	BLOC1S2	Q6QNY1	142 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	DHX32	Q7L7V1	743 aa	Known RBP	29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	GMCL1P1	Q8NEA9	526 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	ANKS1A	Q92625	1134 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	NUP88	Q99567	741 aa	Predicted RBP	29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	BACH2	Q9BYV9	841 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	KAT14	Q9H8E8	782 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	RNF186	Q9NXI6	227 aa		29.16	■■■□□ 2.26
RBBP6-211	ENST00000568316	HMGB1	P09429	215 aa	Known RBP	29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	WTAP	Q15007	396 aa		29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	TAF1C	Q15572	869 aa	Predicted RBP	29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	RASGRP2	Q7LDG7	609 aa		29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	IGDCC4	Q8TDY8	1250 aa		29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	BEGAIN	Q9BUH8	593 aa		29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	SENP2	Q9HC62	589 aa		29.15	■■■□□ 2.26
RBBP6-211	ENST00000568316	TRPA1	O75762	1119 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	ALDH1A1	P00352	501 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	ANAPC15	P60006	121 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	PABPC4	Q13310	644 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	FAM83B	Q5T0W9	1011 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	TMEM87B	Q96K49	555 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	TANGO6	Q9C0B7	1094 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	UPF2	Q9HAU5	1272 aa	Known RBP	29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	ZCCHC17	Q9NP64	241 aa	Known RBP	29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	WBP1L	Q9NX94	342 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	SLC45A1	Q9Y2W3	748 aa		29.14	■■■□□ 2.26
RBBP6-211	ENST00000568316	SH2B2	O14492	632 aa	Predicted RBP	29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	WDR46	O15213	610 aa	Known RBP	29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	CYP2C8	P10632	490 aa		29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	EXOSC10	Q01780	885 aa	Known RBP	29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	PNMA1	Q8ND90	353 aa		29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	ISY1	Q9ULR0	285 aa	Known RBP	29.13	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L15	C9J2P7	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L13	C9JLJ4	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L11	C9JVI0	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L18	D6R9N7	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L22	D6RA61	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L17	D6RBQ6	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L19	D6RCP7	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L20	D6RJB6	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	RPS6KB1	P23443	525 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	HOXA7	P31268	230 aa	Predicted RBP	29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	IRX3	P78415	501 aa	Predicted RBP	29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	USP17L24	Q0WX57	530 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	MTA3	Q9BTC8	594 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	C22orf23	Q9BZE7	217 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	UPF3B	Q9BZI7	483 aa	Known RBP	29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	ASCC2	Q9H1I8	757 aa	Predicted RBP	29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	LY9	Q9HBG7	655 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	WDR19	Q8NEZ3	1342 aa		29.12	■■■□□ 2.25
RBBP6-211	ENST00000568316	OSBP	P22059	807 aa		29.11	■■■□□ 2.25
RBBP6-211	ENST00000568316	SLC1A4	P43007	532 aa		29.11	■■■□□ 2.25
RBBP6-211	ENST00000568316	CRHR2	Q13324	411 aa		29.11	■■■□□ 2.25
RBBP6-211	ENST00000568316	PARK7	Q99497	189 aa	Known RBP	29.11	■■■□□ 2.25
RBBP6-211	ENST00000568316	TM6SF1	Q9BZW5	370 aa		29.11	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms