RNA–Protein interactions for RNA: ENST00000567118.5

PKM-219, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 2,254 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-219ENST00000567118 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
PKM-219ENST00000567118 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
PKM-219ENST00000567118 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
PKM-219ENST00000567118 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
PKM-219ENST00000567118 H3BQV1 296 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 EVCP57679 992 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 ANGEL2Q5VTE6 544 aaKnown RBP13.12□□□□□ -0.31
PKM-219ENST00000567118 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 WDR19Q8NEZ3 1342 aa13.12□□□□□ -0.31
PKM-219ENST00000567118 H7C1D1 291 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
PKM-219ENST00000567118 TROAPQ12815 778 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 CERKLQ49MI3 558 aaPredicted RBP13.11□□□□□ -0.31
PKM-219ENST00000567118 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.311e-7■■■■□ 21.3
PKM-219ENST00000567118 ZNF287Q9HBT7 754 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 PDIA4P13667 645 aaKnown RBP13.11□□□□□ -0.31
PKM-219ENST00000567118 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
PKM-219ENST00000567118 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
PKM-219ENST00000567118 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
PKM-219ENST00000567118 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 AP5Z1O43299 807 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 IGSF3O75054 1194 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 GH2P01242 217 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 SEPT2Q15019 361 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 ROBO3Q96MS0 1386 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 NTRK3Q16288 839 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 GPC2Q8N158 579 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 TMTC2Q8N394 836 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
PKM-219ENST00000567118 V9GY48 417 aaPredicted RBP13.1□□□□□ -0.31
PKM-219ENST00000567118 DYNC1I1O14576 645 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 DHX16O60231 1041 aaKnown RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 PDCP20941 246 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 GGA3Q9NZ52 723 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 ELP1O95163 1332 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 ENTPD3O75355 529 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 KRT85P78386 507 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.319e-12■■□□□ 11.6
PKM-219ENST00000567118 NBPF12Q5TAG4 269 aaPredicted RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 SPICE1Q8N0Z3 855 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 SRBD1Q8N5C6 995 aaKnown RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 FAM151AQ8WW52 585 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 DPF2Q92785 391 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 ZBED3Q96IU2 234 aaPredicted RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
PKM-219ENST00000567118 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
PKM-219ENST00000567118 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
PKM-219ENST00000567118 ALG1Q9BT22 464 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.323e-7■□□□□ 10.4
PKM-219ENST00000567118 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 ARFGEF1Q9Y6D6 1849 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 LAMB1P07942 1786 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 LIG1P18858 919 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
PKM-219ENST00000567118 ABCB5Q2M3G0 1257 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
PKM-219ENST00000567118 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
PKM-219ENST00000567118 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 ZNF526Q8TF50 670 aaPredicted RBP13.08□□□□□ -0.32
PKM-219ENST00000567118 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
PKM-219ENST00000567118 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
PKM-219ENST00000567118 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
PKM-219ENST00000567118 SLC16A2P36021 539 aa13.07□□□□□ -0.32
PKM-219ENST00000567118 DGKZQ13574 1117 aa13.07□□□□□ -0.32
PKM-219ENST00000567118 DGKHQ86XP1 1220 aa13.07□□□□□ -0.32
PKM-219ENST00000567118 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
PKM-219ENST00000567118 LLPHQ9BRT6 129 aaKnown RBP13.07□□□□□ -0.32
PKM-219ENST00000567118 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
PKM-219ENST00000567118 ECE1P42892 770 aa13.06□□□□□ -0.32
PKM-219ENST00000567118 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
PKM-219ENST00000567118 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
PKM-219ENST00000567118 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
PKM-219ENST00000567118 FOXP4Q8IVH2 680 aaPredicted RBP13.06□□□□□ -0.32
PKM-219ENST00000567118 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
PKM-219ENST00000567118 MTMR14Q8NCE2 650 aa13.06□□□□□ -0.32
PKM-219ENST00000567118 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
PKM-219ENST00000567118 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms