RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 UTP14AQ9BVJ6 771 aaKnown RBP11.35□□□□□ -0.59
CFDP1-206ENST00000566254 DBNDD1Q9H9R9 158 aa11.35□□□□□ -0.59
CFDP1-206ENST00000566254 KCNMB2Q9Y691 235 aa11.35□□□□□ -0.59
CFDP1-206ENST00000566254 ASTN2O75129 1339 aaPredicted RBP11.35□□□□□ -0.59
CFDP1-206ENST00000566254 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 TBC1D8O95759 1140 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 PTSQ03393 145 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
CFDP1-206ENST00000566254 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 AKAP11Q9UKA4 1901 aa11.34□□□□□ -0.59
CFDP1-206ENST00000566254 SLC35F4A4IF30 521 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 HTATSF1O43719 755 aaKnown RBP11.33□□□□□ -0.6
CFDP1-206ENST00000566254 GRAPQ13588 217 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 LBRQ14739 615 aaKnown RBP11.33□□□□□ -0.6
CFDP1-206ENST00000566254 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
CFDP1-206ENST00000566254 KIF4BQ2VIQ3 1234 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 EFHC2Q5JST6 749 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
CFDP1-206ENST00000566254 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
CFDP1-206ENST00000566254 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 THBS1P07996 1170 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 EPB42P16452 691 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
CFDP1-206ENST00000566254 FGD1P98174 961 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
CFDP1-206ENST00000566254 ORC1Q13415 861 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 XKR5Q6UX68 686 aa11.32□□□□□ -0.6
CFDP1-206ENST00000566254 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
CFDP1-206ENST00000566254 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
CFDP1-206ENST00000566254 FNDC3AQ9Y2H6 1198 aaKnown RBP11.32□□□□□ -0.6
CFDP1-206ENST00000566254 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
CFDP1-206ENST00000566254 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
CFDP1-206ENST00000566254 VAMP1P23763 118 aa11.31□□□□□ -0.6
CFDP1-206ENST00000566254 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
CFDP1-206ENST00000566254 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
CFDP1-206ENST00000566254 MOB2Q70IA6 237 aa11.31□□□□□ -0.6
CFDP1-206ENST00000566254 PNISRQ8TF01 805 aaKnown RBP11.31□□□□□ -0.6
CFDP1-206ENST00000566254 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
CFDP1-206ENST00000566254 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
CFDP1-206ENST00000566254 BRD7Q9NPI1 651 aa11.31□□□□□ -0.6
CFDP1-206ENST00000566254 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
CFDP1-206ENST00000566254 GPR25O00155 361 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 ECE2O60344 883 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 ANXA1P04083 346 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 NEFLP07196 543 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 NFE2L2Q16236 605 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 ANGEL2Q5VTE6 544 aaKnown RBP11.3□□□□□ -0.6
CFDP1-206ENST00000566254 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
CFDP1-206ENST00000566254 RIPOR1Q6ZS17 1223 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 NSFL1CQ9UNZ2 370 aaKnown RBP11.3□□□□□ -0.6
CFDP1-206ENST00000566254 SCAF8Q9UPN6 1271 aaKnown RBP11.3□□□□□ -0.6
CFDP1-206ENST00000566254 LAMB2P55268 1798 aa11.3□□□□□ -0.6
CFDP1-206ENST00000566254 KDM3BQ7LBC6 1761 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 EIF1AYO14602 144 aaKnown RBP11.29□□□□□ -0.6
CFDP1-206ENST00000566254 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
CFDP1-206ENST00000566254 RALBP1Q15311 655 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 FIGNL1Q6PIW4 674 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 DUSP9Q99956 384 aaKnown RBP11.29□□□□□ -0.6
CFDP1-206ENST00000566254 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
CFDP1-206ENST00000566254 DNAJC25Q9H1X3 360 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 TAF1P21675 1872 aa11.29□□□□□ -0.6
CFDP1-206ENST00000566254 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 EFSO43281 561 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 TNFRSF21O75509 655 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 FAM157BP0CG42 384 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 GPSM2P81274 684 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 UBAP2LQ14157 1087 aaKnown RBP11.28□□□□□ -0.6
CFDP1-206ENST00000566254 ALG1LQ6GMV1 187 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 ZNF438Q7Z4V0 828 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
CFDP1-206ENST00000566254 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 IGSF5Q9NSI5 407 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
CFDP1-206ENST00000566254 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
CFDP1-206ENST00000566254 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 XYLBO75191 536 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
CFDP1-206ENST00000566254 RIPK4P57078 832 aa11.27□□□□□ -0.61
CFDP1-206ENST00000566254 FKBP1BP68106 108 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms