RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MCM3APO60318 1980 aa15.55■□□□□ 0.08
RNF40-208ENST00000565995 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
RNF40-208ENST00000565995 SEPT4O43236 478 aa15.55■□□□□ 0.08
RNF40-208ENST00000565995 PLCD1P51178 756 aa15.55■□□□□ 0.08
RNF40-208ENST00000565995 SMAD3P84022 425 aaKnown RBP15.55■□□□□ 0.08
RNF40-208ENST00000565995 GJC2Q5T442 439 aaPredicted RBP15.55■□□□□ 0.08
RNF40-208ENST00000565995 ABRAQ8N0Z2 381 aa15.55■□□□□ 0.08
RNF40-208ENST00000565995 MOV10L1Q9BXT6 1211 aaKnown RBP15.55■□□□□ 0.08
RNF40-208ENST00000565995 TTC28Q96AY4 2481 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 SURF6O75683 361 aaKnown RBP15.54■□□□□ 0.08
RNF40-208ENST00000565995 ADORA2AP29274 412 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 WDR78Q5VTH9 848 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 DPP9Q86TI2 863 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 MAGEB6Q8N7X4 407 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 MIGA1Q8NAN2 632 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 EAF2Q96CJ1 260 aaPredicted RBP15.54■□□□□ 0.08
RNF40-208ENST00000565995 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 RIOK1Q9BRS2 568 aaKnown RBP15.54■□□□□ 0.08
RNF40-208ENST00000565995 SPATC1LQ9H0A9 340 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 GBF1Q92538 1859 aa15.54■□□□□ 0.08
RNF40-208ENST00000565995 GREB1LQ9C091 1923 aaPredicted RBP15.53■□□□□ 0.08
RNF40-208ENST00000565995 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 KBTBD13C9JR72 458 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 COBLO75128 1261 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 BCAR3O75815 825 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 IDH1O75874 414 aaKnown RBP15.53■□□□□ 0.08
RNF40-208ENST00000565995 MAP3K12Q12852 859 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 C9orf50Q5SZB4 431 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 TMEM57Q8N5G2 664 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 MROH8Q9H579 483 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 PDLIM7Q9NR12 457 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 TLR7Q9NYK1 1049 aaKnown RBP15.53■□□□□ 0.08
RNF40-208ENST00000565995 ATP11BQ9Y2G3 1177 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
RNF40-208ENST00000565995 TMEM265A0A087WTH1 108 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 OS9Q13438 667 aaPredicted RBP15.52■□□□□ 0.08
RNF40-208ENST00000565995 SEPT2Q15019 361 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 LRRC41Q15345 812 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 BADQ92934 168 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 TTYH1Q9H313 450 aaPredicted RBP15.52■□□□□ 0.08
RNF40-208ENST00000565995 SLC5A4Q9NY91 659 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 NRBP1Q9UHY1 535 aa15.52■□□□□ 0.08
RNF40-208ENST00000565995 NCOR1O75376 2440 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 TRIM43BA6NCK2 446 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 ERCC3P19447 782 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 DSG3P32926 999 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 MAFAQ8NHW3 353 aaPredicted RBP15.51■□□□□ 0.07
RNF40-208ENST00000565995 CLUAP1Q96AJ1 413 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 TRIM43Q96BQ3 446 aaPredicted RBP15.51■□□□□ 0.07
RNF40-208ENST00000565995 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
RNF40-208ENST00000565995 ANTXR1Q9H6X2 564 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 ADAMTS5Q9UNA0 930 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 CHD9Q3L8U1 2897 aa15.51■□□□□ 0.07
RNF40-208ENST00000565995 ADCYAP1R1P41586 468 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 SH3RF1Q7Z6J0 888 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 FRAT1Q92837 279 aaPredicted RBP15.5■□□□□ 0.07
RNF40-208ENST00000565995 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 PHF24Q9UPV7 400 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
RNF40-208ENST00000565995 ROBO3Q96MS0 1386 aa15.49■□□□□ 0.07
RNF40-208ENST00000565995 POLR3DP05423 398 aaPredicted RBP15.49■□□□□ 0.07
RNF40-208ENST00000565995 ZKSCAN2Q63HK3 967 aa15.49■□□□□ 0.07
RNF40-208ENST00000565995 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
RNF40-208ENST00000565995 DIS3Q9Y2L1 958 aaKnown RBP15.49■□□□□ 0.07
RNF40-208ENST00000565995 REV3LO60673 3130 aa15.49■□□□□ 0.07
RNF40-208ENST00000565995 MAGEB6P1A0A0J9YX57 407 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 KIAA0355O15063 1070 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 SLC25A27O95847 323 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 ITGB8P26012 769 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 TLE2Q04725 743 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
RNF40-208ENST00000565995 PRAMEF19Q5SWL8 479 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 ANO1Q5XXA6 986 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 MYLIPQ8WY64 445 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 TANGO6Q9C0B7 1094 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 SWAP70Q9UH65 585 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 TMX2Q9Y320 296 aa15.48■□□□□ 0.07
RNF40-208ENST00000565995 FCER1AP12319 257 aa15.47■□□□□ 0.07
RNF40-208ENST00000565995 EVX2Q03828 476 aa15.47■□□□□ 0.07
RNF40-208ENST00000565995 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
RNF40-208ENST00000565995 SYMPKQ92797 1274 aaKnown RBP15.47■□□□□ 0.07
RNF40-208ENST00000565995 CRNKL1Q9BZJ0 848 aaKnown RBP15.47■□□□□ 0.07
RNF40-208ENST00000565995 DCP1AQ9NPI6 582 aaPredicted RBP15.47■□□□□ 0.07
RNF40-208ENST00000565995 PRDM5Q9NQX1 630 aaPredicted RBP15.47■□□□□ 0.07
RNF40-208ENST00000565995 TRANK1O15050 2925 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 TCRBV5S4A2TA0A5A2 114 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 CLTBP09497 229 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
RNF40-208ENST00000565995 FERMT2Q96AC1 680 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 TOX2Q96NM4 488 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.07
RNF40-208ENST00000565995 VCPKMTQ9H867 229 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 MCM9Q9NXL9 1143 aa15.46■□□□□ 0.07
RNF40-208ENST00000565995 BDP1A6H8Y1 2624 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms