RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 LBX1P52954 281 aa17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 MKL1Q969V6 931 aa17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 BEGAINQ9BUH8 593 aa17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 SLKQ9H2G2 1235 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-203ENST00000563663 TAF1CQ15572 869 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 RCSD1Q6JBY9 416 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 ANO2Q9NQ90 1003 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 TLR2O60603 784 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 DDIT3P35638 169 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 OTUD7BQ6GQQ9 843 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 FEZ1Q99689 392 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 TCP11L1Q9NUJ3 509 aa17.4■□□□□ 0.38
SCAMP2-203ENST00000563663 GPR25O00155 361 aa17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 USP14P54578 494 aa17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 C17orf99Q6UX52 265 aa17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 RNF41Q9H4P4 317 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 DOCK3Q8IZD9 2030 aa17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 MGAMO43451 1857 aa17.39■□□□□ 0.37
SCAMP2-203ENST00000563663 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 B4E1Z4 1266 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 BCRP11274 1271 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 RRP12Q5JTH9 1297 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 SLC27A2O14975 620 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 TTLL1O95922 423 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 RASGRP2Q7LDG7 609 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 ZNF296Q8WUU4 475 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 PARK7Q99497 189 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 PRDM10Q9NQV6 1147 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 ZSWIM5Q9P217 1185 aa17.38■□□□□ 0.37
SCAMP2-203ENST00000563663 E7EWF7 191 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 KDM4AO75164 1064 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 RABEP1Q15276 862 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 CREB3L3Q68CJ9 461 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 SPICE1Q8N0Z3 855 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 LPAR1Q92633 364 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 KCNB2Q92953 911 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 ZFYVE28Q9HCC9 887 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
SCAMP2-203ENST00000563663 REC8O95072 547 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 NDUFB10O96000 172 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 CTGFP29279 349 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 NT5C2P49902 561 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 CATSPERGQ6ZRH7 1159 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 KIAA1211Q6ZU35 1233 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 RASEFQ8IZ41 740 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 GMCL1P1Q8NEA9 526 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 IL27Q8NEV9 243 aa17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 RPAP3Q9H6T3 665 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-203ENST00000563663 F5H6K3 240 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 PEX10O60683 326 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 ANTXR2P58335 489 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 KLRC3Q07444 240 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 ESR2Q92731 530 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 P2RX7Q99572 595 aaKnown RBP17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 SH2D4AQ9H788 454 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 ANKS1AQ92625 1134 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 TXNRD2Q9NNW7 524 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 CPA4Q9UI42 421 aa17.35■□□□□ 0.37
SCAMP2-203ENST00000563663 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 WDR46O15213 610 aaKnown RBP17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 HERVK_113P62684 666 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 SEC23AQ15436 765 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 TSGA10IPQ3SY00 556 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 LBX2Q6XYB7 198 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 ENAHQ8N8S7 591 aaPredicted RBP17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 ZKSCAN3Q9BRR0 538 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 CNNM2Q9H8M5 875 aa17.34■□□□□ 0.37
SCAMP2-203ENST00000563663 STX8Q9UNK0 236 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms