RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 IQCA1Q86XH1 822 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 ZSCAN10Q96SZ4 725 aaPredicted RBP13.64□□□□□ -0.23
HERC1-214ENST00000561400 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 CSADQ9Y600 493 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
HERC1-214ENST00000561400 PTPRAP18433 802 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 SEC23AQ15436 765 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 ENAHQ8N8S7 591 aaPredicted RBP13.63□□□□□ -0.23
HERC1-214ENST00000561400 SENP2Q9HC62 589 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 TNKSO95271 1327 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
HERC1-214ENST00000561400 NOVP48745 357 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 NEK4P51957 841 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 NBPF20Q3BBV1 942 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 SAPCD2Q86UD0 394 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 ELP3Q9H9T3 547 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 PTPRFP10586 1907 aa13.63□□□□□ -0.23
HERC1-214ENST00000561400 EEF2P13639 858 aaKnown RBP13.62□□□□□ -0.23
HERC1-214ENST00000561400 HUNKP57058 714 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 TTC14Q96N46 770 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 STX8Q9UNK0 236 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 A0A1W2PRG0 241 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 UNCXA6NJT0 531 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 ICA1Q05084 483 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 TMEM67Q5HYA8 995 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 Q6ZUG5 572 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 CLIP2Q9UDT6 1046 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 ZHX2Q9Y6X8 837 aa13.62□□□□□ -0.23
HERC1-214ENST00000561400 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
HERC1-214ENST00000561400 TTLL1O95922 423 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 ECE1P42892 770 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 ATP2B2Q01814 1243 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 RABEP1Q15276 862 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 DGKHQ86XP1 1220 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 TLL2Q9Y6L7 1015 aa13.61□□□□□ -0.23
HERC1-214ENST00000561400 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 TOB2Q14106 344 aaPredicted RBP13.6□□□□□ -0.23
HERC1-214ENST00000561400 WTAPQ15007 396 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 SART3Q15020 963 aaKnown RBP13.6□□□□□ -0.23
HERC1-214ENST00000561400 ANKS1AQ92625 1134 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 ERICH2A1L162 156 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 GJA5P36382 358 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 SPP2Q13103 211 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 ERO1BQ86YB8 467 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 MKL1Q969V6 931 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 OPTNQ96CV9 577 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
HERC1-214ENST00000561400 AFG3L2Q9Y4W6 797 aa13.6□□□□□ -0.23
HERC1-214ENST00000561400 LIFRP42702 1097 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 APLP1P51693 650 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 AK2P54819 239 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 CCDC178Q5BJE1 867 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 ZNF280CQ8ND82 737 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 BRF1Q92994 677 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 IRF6O14896 467 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 CD2BP2O95400 341 aaKnown RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 IRX5P78411 483 aaPredicted RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 PPATQ06203 517 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 ALDH8A1Q9H2A2 487 aaPredicted RBP13.59□□□□□ -0.23
HERC1-214ENST00000561400 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 TMX2Q9Y320 296 aa13.59□□□□□ -0.23
HERC1-214ENST00000561400 TRIM75PA6NK02 468 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
HERC1-214ENST00000561400 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 DGKZQ13574 1117 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 MTMR2Q13614 643 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
HERC1-214ENST00000561400 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
HERC1-214ENST00000561400 TMTC2Q8N394 836 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms