RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
SPG11-207ENST00000558138 LACTBP83111 547 aaPredicted RBP10.62□□□□□ -0.71
SPG11-207ENST00000558138 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
SPG11-207ENST00000558138 BMP2KLQ5H9B9 411 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 AKNAD1Q5T1N1 836 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 C17orf99Q6UX52 265 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
SPG11-207ENST00000558138 LPAR1Q92633 364 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 ESR2Q92731 530 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 CHMP4CQ96CF2 233 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 C12orf42Q96LP6 360 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 VCPKMTQ9H867 229 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 INCENPQ9NQS7 918 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 TMX2Q9Y320 296 aa10.62□□□□□ -0.71
SPG11-207ENST00000558138 CCDC85CA6NKD9 419 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 WDR46O15213 610 aaKnown RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 FOXP2O15409 715 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 CDC45O75419 566 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 FLOT1O75955 427 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 PCP11498 1178 aaKnown RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 HERVK_113P62684 666 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 TRDNQ13061 729 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 PLS1Q14651 629 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 FAM110CQ1W6H9 321 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 LRRC47Q8N1G4 583 aaKnown RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 GPRC5AQ8NFJ5 357 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 RAET1EQ8TD07 263 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 STAG1Q8WVM7 1258 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 CEP95Q96GE4 821 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 ARHGAP39Q9C0H5 1083 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 ANAPC4Q9UJX5 808 aa10.61□□□□□ -0.71
SPG11-207ENST00000558138 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
SPG11-207ENST00000558138 SGSM2O43147 1006 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 ORC4O43929 436 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
SPG11-207ENST00000558138 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 RALYLQ86SE5 291 aaKnown RBP10.6□□□□□ -0.71
SPG11-207ENST00000558138 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 COA7Q96BR5 231 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 ABHD8Q96I13 439 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 MTMR4Q9NYA4 1195 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 NYAP2Q9P242 653 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPG11-207ENST00000558138 MYH4Q9Y623 1939 aa10.6□□□□□ -0.71
SPG11-207ENST00000558138 MYPNQ86TC9 1320 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 ADGRA2Q96PE1 1338 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 NMT2O60551 498 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 GNRH1P01148 92 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 BCRP11274 1271 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 SLC4A3P48751 1232 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 CCNA1P78396 465 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 COG2Q14746 738 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 CCDC96Q2M329 555 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 SLFN13Q68D06 897 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 ESYT1Q9BSJ8 1104 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 UBAC1Q9BSL1 405 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 KRT23Q9C075 422 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 IL25Q9H293 177 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 CNNM2Q9H8M5 875 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 HOXC10Q9NYD6 342 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 BIN2Q9UBW5 565 aaPredicted RBP10.59□□□□□ -0.71
SPG11-207ENST00000558138 PTPN22Q9Y2R2 807 aa10.59□□□□□ -0.71
SPG11-207ENST00000558138 NEDD4P46934 1319 aa10.58□□□□□ -0.71
SPG11-207ENST00000558138 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 PLIN4Q96Q06 1357 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 B4E1Z4 1266 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 F5H6K3 240 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 KDM4AO75164 1064 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 NDUFB10O96000 172 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 SLC1A4P43007 532 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 ERVK-9P63128 1117 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 ERVK-24P63145 666 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 PTH1RQ03431 593 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 KLRC3Q07444 240 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 SLC9C1Q4G0N8 1177 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 CCDC178Q5BJE1 867 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 TRIM47Q96LD4 638 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 NUP88Q99567 741 aaPredicted RBP10.58□□□□□ -0.72
SPG11-207ENST00000558138 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPG11-207ENST00000558138 HPS5Q9UPZ3 1129 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 RBM8AQ9Y5S9 174 aaKnown RBP10.58□□□□□ -0.72
SPG11-207ENST00000558138 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
SPG11-207ENST00000558138 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 IGKV6D-41A0A0C4DH26 115 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 ERICH2A1L162 156 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SPG11-207ENST00000558138 PEX10O60683 326 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
SPG11-207ENST00000558138 PRMT2P55345 433 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 PRKCZQ05513 592 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 KIAA1755Q5JYT7 1200 aa10.57□□□□□ -0.72
SPG11-207ENST00000558138 NBPF11Q86T75 865 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms