RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 PNMA1Q8ND90 353 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 GOPCQ9HD26 462 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 GPHNQ9NQX3 736 aaPredicted RBP14.48□□□□□ -0.09
TPM1-209ENST00000558072 IL17RBQ9NRM6 502 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 RBM27Q9P2N5 1060 aaKnown RBP14.48□□□□□ -0.09
TPM1-209ENST00000558072 GOLGA8BA8MQT2 603 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 PDIA3P30101 505 aaKnown RBP14.47□□□□□ -0.09
TPM1-209ENST00000558072 GUCY1A2P33402 732 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 USP14P54578 494 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
TPM1-209ENST00000558072 DGKZQ13574 1117 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 CUL4AQ13619 759 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 C2orf69Q8N8R5 385 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM1-209ENST00000558072 ELP3Q9H9T3 547 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 GBA2Q9HCG7 927 aaPredicted RBP14.47□□□□□ -0.09
TPM1-209ENST00000558072 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 TPCN1Q9ULQ1 816 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 SNCAIPQ9Y6H5 919 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 NID2Q14112 1375 aa14.47□□□□□ -0.09
TPM1-209ENST00000558072 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 SMARCA1P28370 1054 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 MKRN3Q13064 507 aaKnown RBP14.46□□□□□ -0.09
TPM1-209ENST00000558072 VGLL4Q14135 290 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 SEPT2Q15019 361 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 RTN1Q16799 776 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
TPM1-209ENST00000558072 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.46□□□□□ -0.09
TPM1-209ENST00000558072 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 FANCBQ8NB91 859 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 GMCL1P1Q8NEA9 526 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 DCAF4Q8WV16 495 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 GTF3C6Q969F1 213 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 TMEM47Q9BQJ4 181 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 WDR18Q9BV38 432 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.46□□□□□ -0.09
TPM1-209ENST00000558072 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
TPM1-209ENST00000558072 C19orf81C9J6K1 198 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 EEF2P13639 858 aaKnown RBP14.45□□□□□ -0.1
TPM1-209ENST00000558072 ATP2B2Q01814 1243 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 ME3Q16798 604 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 ASPRV1Q53RT3 343 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 NOL8Q76FK4 1167 aaKnown RBP14.45□□□□□ -0.1
TPM1-209ENST00000558072 MICU3Q86XE3 530 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 TRIM22Q8IYM9 498 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 NUP133Q8WUM0 1156 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 WASF1Q92558 559 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 LPAR1Q92633 364 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
TPM1-209ENST00000558072 PARP1P09874 1014 aaKnown RBP14.44□□□□□ -0.1
TPM1-209ENST00000558072 PDCP20941 246 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 GJA5P36382 358 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 AKAP17AQ02040 695 aaKnown RBP14.44□□□□□ -0.1
TPM1-209ENST00000558072 TROAPQ12815 778 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 RGS22Q8NE09 1264 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 FEZ1Q99689 392 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 BRPF3Q9ULD4 1205 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 SMC3Q9UQE7 1217 aa14.44□□□□□ -0.1
TPM1-209ENST00000558072 MYH4Q9Y623 1939 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 USP17L10C9JJH3 530 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 CD2BP2O95400 341 aaKnown RBP14.43□□□□□ -0.1
TPM1-209ENST00000558072 PPATQ06203 517 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 FSTL1Q12841 308 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 TRAF1Q13077 416 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 GRM4Q14833 912 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 ZYXQ15942 572 aaKnown RBP14.43□□□□□ -0.1
TPM1-209ENST00000558072 ERO1BQ86YB8 467 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 ZNF280CQ8ND82 737 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 ACER1Q8TDN7 264 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 GMCL1Q96IK5 515 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 LARP6Q9BRS8 491 aaKnown RBP14.43□□□□□ -0.1
TPM1-209ENST00000558072 KIAA1683Q9H0B3 1180 aa14.43□□□□□ -0.1
TPM1-209ENST00000558072 IFNAR1P17181 557 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 PTPRAP18433 802 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 ECE1P42892 770 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 SLC1A4P43007 532 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 HUNKP57058 714 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 SCRN1Q12765 414 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 STK3Q13188 491 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 GRM1Q13255 1194 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 SLFN13Q68D06 897 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 USP17L2Q6R6M4 530 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 CCDC83Q8IWF9 413 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 FAM177A1Q8N128 213 aaPredicted RBP14.42□□□□□ -0.1
TPM1-209ENST00000558072 LRRC47Q8N1G4 583 aaKnown RBP14.42□□□□□ -0.1
TPM1-209ENST00000558072 FAM184AQ8NB25 1140 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 OTUD5Q96G74 571 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 VCPKMTQ9H867 229 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 ABT1Q9ULW3 272 aaKnown RBP14.42□□□□□ -0.1
TPM1-209ENST00000558072 MTMR7Q9Y216 660 aa14.42□□□□□ -0.1
TPM1-209ENST00000558072 PTPRFP10586 1907 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 F5H6K3 240 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 CXCL11O14625 94 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 SNHG28P0DPA3 235 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 XBP1P17861 261 aa14.41□□□□□ -0.1
TPM1-209ENST00000558072 CCT2P78371 535 aaKnown RBP14.41□□□□□ -0.1
TPM1-209ENST00000558072 KLRC3Q07444 240 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms