RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 SOX1O00570 391 aaPredicted RBP18.86■□□□□ 0.61
TUBB3-214ENST00000557490 PRDM1O75626 825 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 GNRH1P01148 92 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
TUBB3-214ENST00000557490 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-214ENST00000557490 FMNL1O95466 1100 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-214ENST00000557490 FGAP02671 866 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 EEF2P13639 858 aaKnown RBP18.85■□□□□ 0.61
TUBB3-214ENST00000557490 VCAM1P19320 739 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 PSMC4P43686 418 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 FCGRTP55899 365 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 ANKRD13CQ8N6S4 541 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 SHISA4Q96DD7 197 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
TUBB3-214ENST00000557490 ARHGAP39Q9C0H5 1083 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 TMX2Q9Y320 296 aa18.85■□□□□ 0.61
TUBB3-214ENST00000557490 ZMYM6O95789 1325 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 HOXD10P28358 340 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 HERVK_113P62684 666 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 CTDSPL2Q05D32 466 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 FAM110CQ1W6H9 321 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 SIAH1Q8IUQ4 282 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 SH3TC2Q8TF17 1288 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-214ENST00000557490 LPAR1Q92633 364 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 LRCH3Q96II8 777 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.84■□□□□ 0.61
TUBB3-214ENST00000557490 RPAP3Q9H6T3 665 aaPredicted RBP18.84■□□□□ 0.61
TUBB3-214ENST00000557490 ANAPC4Q9UJX5 808 aa18.84■□□□□ 0.61
TUBB3-214ENST00000557490 TSPY3P0CV98 308 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 TSPY8P0CW00 308 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 PRMT2P55345 433 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 RUFY2Q8WXA3 655 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 TRIM47Q96LD4 638 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 VCPKMTQ9H867 229 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 ZSWIM8A7E2V4 1837 aa18.83■□□□□ 0.6
TUBB3-214ENST00000557490 TFAP4Q01664 338 aa18.82■□□□□ 0.6
TUBB3-214ENST00000557490 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
TUBB3-214ENST00000557490 NYAP2Q9P242 653 aa18.82■□□□□ 0.6
TUBB3-214ENST00000557490 MYH8P13535 1937 aa18.82■□□□□ 0.6
TUBB3-214ENST00000557490 RAD21O60216 631 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 CTGFP29279 349 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 NEDD1Q8NHV4 660 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 TANGO6Q9C0B7 1094 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 MORF4L1Q9UBU8 362 aa18.81■□□□□ 0.6
TUBB3-214ENST00000557490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
TUBB3-214ENST00000557490 RAD50Q92878 1312 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 IGKV6D-41A0A0C4DH26 115 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 A0A1W2PPC1 479 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 CHMLP26374 656 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 HAND2P61296 217 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 PPP4R3BQ5MIZ7 849 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 SPICE1Q8N0Z3 855 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 GPRC5AQ8NFJ5 357 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 PAGR1Q9BTK6 254 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 TOMM22Q9NS69 142 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 SRRDQ9UH36 339 aa18.8■□□□□ 0.6
TUBB3-214ENST00000557490 TSPY2A6NKD2 308 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 TNPO2O14787 897 aaKnown RBP18.79■□□□□ 0.6
TUBB3-214ENST00000557490 WDR46O15213 610 aaKnown RBP18.79■□□□□ 0.6
TUBB3-214ENST00000557490 ORC4O43929 436 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 RANBP6O60518 1105 aaKnown RBP18.79■□□□□ 0.6
TUBB3-214ENST00000557490 TTLL1O95922 423 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 COG2Q14746 738 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 KIAA1755Q5JYT7 1200 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 COA7Q96BR5 231 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 INCENPQ9NQS7 918 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 MTMR4Q9NYA4 1195 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 HOXC10Q9NYD6 342 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 RBPJLQ9UBG7 517 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 VCANP13611 3396 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 PLIN4Q96Q06 1357 aa18.79■□□□□ 0.6
TUBB3-214ENST00000557490 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 ZNF213O14771 459 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 FGRP09769 529 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 PCP11498 1178 aaKnown RBP18.78■□□□□ 0.6
TUBB3-214ENST00000557490 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
TUBB3-214ENST00000557490 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 UBE2Q1Q7Z7E8 422 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
TUBB3-214ENST00000557490 COL25A1Q9BXS0 654 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-214ENST00000557490 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-214ENST00000557490 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 RABGAP1Q9Y3P9 1069 aa18.78■□□□□ 0.6
TUBB3-214ENST00000557490 ERVK-9P63128 1117 aa18.77■□□□□ 0.6
TUBB3-214ENST00000557490 ERVK-24P63145 666 aa18.77■□□□□ 0.6
TUBB3-214ENST00000557490 AKNAD1Q5T1N1 836 aa18.77■□□□□ 0.6
TUBB3-214ENST00000557490 LBX2Q6XYB7 198 aa18.77■□□□□ 0.6
TUBB3-214ENST00000557490 RAET1EQ8TD07 263 aa18.77■□□□□ 0.6
TUBB3-214ENST00000557490 MKL1Q969V6 931 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms