RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KRT40Q6A162 431 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 C16orf86Q6ZW13 317 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 LUZP1Q86V48 1076 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 MARCH10Q8NA82 808 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 NOC3LQ8WTT2 800 aaKnown RBP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 AK8Q96MA6 479 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 TNMDQ9H2S6 317 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 BOLA2Q9H3K6 86 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ZSWIM5Q9P217 1185 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 NRBP1Q9UHY1 535 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 POTEMA6NI47 508 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 UNCXA6NJT0 531 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 IFIT1P09914 478 aaKnown RBP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 CD44P16070 742 aaKnown RBP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 PTGS1P23219 599 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ITGA6P23229 1130 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 FMR1Q06787 632 aaKnown RBP eCLIP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 NNTQ13423 1086 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 SPATA1Q5VX52 437 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 CTR9Q6PD62 1173 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 VPS37DQ86XT2 251 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ADSSL1Q8N142 457 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 RETREG2Q8NC44 543 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ARXQ96QS3 562 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 LZTS2Q9BRK4 669 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 CCDC87Q9NVE4 849 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-207ENST00000554615 WWC3Q9ULE0 1092 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 SIK3Q9Y2K2 1263 aa3.97□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF532Q9HCE3 1301 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 GBF1Q92538 1859 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 TRIM6-TRIM34B2RNG4 842 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 ANXA1P04083 346 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 HSP90AA1P07900 732 aaKnown RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF165P49910 485 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 ETF1P62495 437 aaKnown RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 XPCQ01831 940 aaPredicted RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 MYL5Q02045 173 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 SEPT2Q15019 361 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 TTI2Q6NXR4 508 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 WDR59Q6PJI9 974 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 BTNL9Q6UXG8 535 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 TMC4Q7Z404 712 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 SLFN11Q7Z7L1 901 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 RABGGTAQ92696 567 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 ZBED3Q96IU2 234 aaPredicted RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 CALR3Q96L12 384 aaKnown RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 MMTAG2Q9BU76 263 aaKnown RBP3.96□□□□□ -1.77
SEC23A-207ENST00000554615 FUT8Q9BYC5 575 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 IL17RBQ9NRM6 502 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 SWAP70Q9UH65 585 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 NARFQ9UHQ1 456 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 CAPN11Q9UMQ6 739 aa3.96□□□□□ -1.77
SEC23A-207ENST00000554615 GPR75-ASB3A0A0A6YYF3 556 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 ANO9A1A5B4 782 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 C19orf67A6NJJ6 358 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 WNT7AO00755 349 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 CAPN15O75808 1086 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 A1BGP04217 495 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 TPM1P09493 284 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 TERF2Q15554 542 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 TAF3Q5VWG9 929 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 MMGT1Q8N4V1 131 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 ENAHQ8N8S7 591 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 LINC00116Q8NCU8 138 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 CFAP61Q8NHU2 1237 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 DPF2Q92785 391 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 DUSP9Q99956 384 aaKnown RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 ARPP21Q9UBL0 812 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 STXBP5LQ9Y2K9 1186 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 STXBP3O00186 592 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 CBFA2T2O43439 604 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 MFAP3LO75121 409 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 SRGNP10124 158 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 ATF3P18847 181 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 SPIRE1Q08AE8 756 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 LONRF3Q496Y0 759 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 EARS2Q5JPH6 523 aaKnown RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 C12orf60Q5U649 245 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 PPP4R3AQ6IN85 833 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 CENPPQ6IPU0 288 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 KRI1Q8N9T8 703 aaKnown RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 CAVIN3Q969G5 261 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 FAM89AQ96GI7 184 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 PAGE5Q96GU1 130 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 FAM84BQ96KN1 310 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 NAP1L5Q96NT1 182 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-207ENST00000554615 KAT6BQ8WYB5 2073 aa3.96□□□□□ -1.78
SEC23A-207ENST00000554615 UBE4BO95155 1302 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 RPTORQ8N122 1335 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ANKRD18BA2A2Z9 1011 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 GTPBP6O43824 516 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 RASA1P20936 1047 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 RHBDL3P58872 404 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 FANCCQ00597 558 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms