RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SLC45A1Q9Y2W3 748 aa19.15■□□□□ 0.66
CHMP1A-209ENST00000550872 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
CHMP1A-209ENST00000550872 OSBPP22059 807 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 CFHR5Q9BXR6 569 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 R3HDMLQ9H3Y0 253 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 GOPCQ9HD26 462 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 ZSWIM5Q9P217 1185 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 STX8Q9UNK0 236 aa19.14■□□□□ 0.65
CHMP1A-209ENST00000550872 CYP2C8P10632 490 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 VCAM1P19320 739 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 STOX1Q6ZVD7 989 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 RALYLQ86SE5 291 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 IQCA1Q86XH1 822 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 MKL1Q969V6 931 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 PARK7Q99497 189 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 ZKSCAN3Q9BRR0 538 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 PNMA3Q9UL41 463 aa19.13■□□□□ 0.65
CHMP1A-209ENST00000550872 LOC285556D6RIA3 1793 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L15C9J2P7 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L13C9JLJ4 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L11C9JVI0 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L18D6R9N7 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L22D6RA61 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L17D6RBQ6 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L19D6RCP7 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L20D6RJB6 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 IRX3P78415 501 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 USP17L24Q0WX57 530 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 CCDC178Q5BJE1 867 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 KIAA1755Q5JYT7 1200 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 LPAR1Q92633 364 aa19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 ASCC2Q9H1I8 757 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 RPAP3Q9H6T3 665 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-209ENST00000550872 F5H6K3 240 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 TLR2O60603 784 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 ZKSCAN1P17029 563 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 KLRC3Q07444 240 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 SMCR8Q8TEV9 937 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 TTC14Q96N46 770 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 ZSCAN10Q96SZ4 725 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 SYNPO2Q9UMS6 1093 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 MYH4Q9Y623 1939 aa19.11■□□□□ 0.65
CHMP1A-209ENST00000550872 GPR25O00155 361 aa19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 TOP1P11387 765 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 CATSPERGQ6ZRH7 1159 aa19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 CYB5R4Q7L1T6 521 aa19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 P2RX7Q99572 595 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 UBAC1Q9BSL1 405 aa19.1■□□□□ 0.65
CHMP1A-209ENST00000550872 WDR46O15213 610 aaKnown RBP19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 EPB41L2O43491 1005 aaKnown RBP19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 EIF5BO60841 1220 aaKnown RBP19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 NDUFB10O96000 172 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 HSPA4P34932 840 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 NOVP48745 357 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 SLFN13Q68D06 897 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 DGKHQ86XP1 1220 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 GMCL1P1Q8NEA9 526 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 TMEM47Q9BQJ4 181 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 USP26Q9BXU7 913 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 TANGO6Q9C0B7 1094 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 CPA4Q9UI42 421 aa19.09■□□□□ 0.65
CHMP1A-209ENST00000550872 FAM83BQ5T0W9 1011 aa19.08■□□□□ 0.64
CHMP1A-209ENST00000550872 RCSD1Q6JBY9 416 aa19.08■□□□□ 0.64
CHMP1A-209ENST00000550872 MB21D2Q8IYB1 491 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-209ENST00000550872 NUP88Q99567 741 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-209ENST00000550872 MTMR7Q9Y216 660 aa19.08■□□□□ 0.64
CHMP1A-209ENST00000550872 TNKSO95271 1327 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 FKTNO75072 461 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 MCCP23508 829 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 KRT32Q14532 448 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 COG2Q14746 738 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 CHST3Q7LGC8 479 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 ENAHQ8N8S7 591 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 ZNF296Q8WUU4 475 aaPredicted RBP19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 ANKS1AQ92625 1134 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 KCNB2Q92953 911 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 CHMP4CQ96CF2 233 aa19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 ISY1Q9ULR0 285 aaKnown RBP19.07■□□□□ 0.64
CHMP1A-209ENST00000550872 ADGRA2Q96PE1 1338 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 ERICH2A1L162 156 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 FLOT1O75955 427 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 MCM5P33992 734 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 HERVK_113P62684 666 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 SP3Q02447 781 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 SART3Q15020 963 aaKnown RBP19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 SAMD1Q6SPF0 538 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 NEK1Q96PY6 1258 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 KAT14Q9H8E8 782 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 HOXC10Q9NYD6 342 aa19.06■□□□□ 0.64
CHMP1A-209ENST00000550872 CASP8AP2Q9UKL3 1982 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms