RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 KIF18AQ8NI77 898 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 WDR66Q8TBY9 1149 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 DPF2Q92785 391 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 PPP1R13BQ96KQ4 1090 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 FANCLQ9NW38 375 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 TFCP2L1Q9NZI6 479 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
PTPRO-208ENST00000542557 CCNL1Q9UK58 526 aaPredicted RBP7.47□□□□□ -1.21
PTPRO-208ENST00000542557 LEMD3Q9Y2U8 911 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 DDX60LQ5H9U9 1706 aaKnown RBP7.47□□□□□ -1.21
PTPRO-208ENST00000542557 FAM205CA6NFA0 338 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 KIF5BP33176 963 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 KCNQ4P56696 695 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 GRAPQ13588 217 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 TTC38Q5R3I4 469 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 DGKHQ86XP1 1220 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 GRAPLQ8TC17 118 aaPredicted RBP7.47□□□□□ -1.21
PTPRO-208ENST00000542557 SH3GLB2Q9NR46 395 aa7.47□□□□□ -1.21
PTPRO-208ENST00000542557 TSPY2A6NKD2 308 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 TOP1P11387 765 aaKnown RBP7.46□□□□□ -1.21
PTPRO-208ENST00000542557 CALML3P27482 149 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 GSTO1P78417 241 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 FMR1Q06787 632 aaKnown RBP eCLIP7.46□□□□□ -1.21
PTPRO-208ENST00000542557 TBX2Q13207 712 aaPredicted RBP7.46□□□□□ -1.21
PTPRO-208ENST00000542557 C12orf60Q5U649 245 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 RCSD1Q6JBY9 416 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 PTF1AQ7RTS3 328 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 CERS3Q8IU89 383 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.21
PTPRO-208ENST00000542557 NGLY1Q96IV0 654 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 INTS13Q9NVM9 706 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 NFE2L3Q9Y4A8 694 aa7.46□□□□□ -1.21
PTPRO-208ENST00000542557 MYCNP04198 464 aaPredicted RBP7.46□□□□□ -1.22
PTPRO-208ENST00000542557 ATP2B1P20020 1258 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 PPP4CP60510 307 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 TXNRD3Q86VQ6 643 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 PDCL2Q8N4E4 241 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 SYMPKQ92797 1274 aaKnown RBP7.46□□□□□ -1.22
PTPRO-208ENST00000542557 C8orf37Q96NL8 207 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 GSDMAQ96QA5 445 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 TCP11L1Q9NUJ3 509 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 TRMT1Q9NXH9 659 aaKnown RBP7.46□□□□□ -1.22
PTPRO-208ENST00000542557 XDHP47989 1333 aa7.46□□□□□ -1.22
PTPRO-208ENST00000542557 A0A087X0B3 334 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 LDHBP07195 334 aaKnown RBP7.45□□□□□ -1.22
PTPRO-208ENST00000542557 CYP2D6P10635 497 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 GNAQP50148 359 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 EVX2Q03828 476 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 SMIM5Q71RC9 77 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PDILTQ8N807 584 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 DHX58Q96C10 678 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PAGE5Q96GU1 130 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 L2HGDHQ9H9P8 463 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 MCM9Q9NXL9 1143 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 hCG_1642624A0A1W2PR95 340 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 TMEM232C9JQI7 657 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ARHGAP6O43182 974 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 NMT2O60551 498 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 DPYDQ12882 1025 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 GRM4Q14833 912 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ARL6IP4Q66PJ3 421 aaKnown RBP7.45□□□□□ -1.22
PTPRO-208ENST00000542557 SPECC1LQ69YQ0 1117 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF804AQ7Z570 1209 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 AMOTL1Q8IY63 956 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 GRAMD1CQ8IYS0 662 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF592Q92610 1267 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ERO1AQ96HE7 468 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 EPSTI1Q96J88 318 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PSMD1Q99460 953 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 KAT14Q9H8E8 782 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PHLPP2Q6ZVD8 1323 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 CDK5RAP2Q96SN8 1893 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 A0A1B0GTH6 734 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 WNT7AO00755 349 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 BAG3O95817 575 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 NLRP5P59047 1200 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PIP4K2BP78356 416 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 PTGDRQ13258 359 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 CUL4BQ13620 913 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 E2F4Q16254 413 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF827Q17R98 1081 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 SPATA1Q5VX52 437 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 GALNT17Q6IS24 598 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 TMEM139Q8IV31 216 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 DAGLBQ8NCG7 672 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 MED15Q96RN5 788 aa7.45□□□□□ -1.22
PTPRO-208ENST00000542557 CGNQ9P2M7 1197 aaKnown RBP7.45□□□□□ -1.22
PTPRO-208ENST00000542557 SPATA31A6Q5VVP1 1343 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 SYNRGQ9UMZ2 1314 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 LDHCP07864 332 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 USP17L8P0C7I0 530 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 RFC4P35249 363 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 USP5P45974 858 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 TFAP4Q01664 338 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 ZNF174Q15697 407 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 TRAPPC3LQ5T215 181 aa7.44□□□□□ -1.22
PTPRO-208ENST00000542557 IQUBQ8NA54 791 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms