RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 CPLX1O14810 134 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 CDKL5O76039 1030 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 CAP2P40123 477 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 KRT85P78386 507 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 FMR1Q06787 632 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMAD3-204ENST00000540846 WTAPQ15007 396 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 DCAF15Q66K64 600 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 IQCA1Q86XH1 822 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 SIAH1Q8IUQ4 282 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 TMTC2Q8N394 836 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 HOOK2Q96ED9 719 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 TRIM34Q9BYJ4 488 aa14.51□□□□□ -0.09
SMAD3-204ENST00000540846 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-204ENST00000540846 PTPRFP10586 1907 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ERICH2A1L162 156 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 FIBPO43427 364 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 USP2O75604 605 aaPredicted RBP14.5□□□□□ -0.09
SMAD3-204ENST00000540846 GH2P01242 217 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 CAVIN1Q6NZI2 390 aaKnown RBP14.5□□□□□ -0.09
SMAD3-204ENST00000540846 TMEM179Q6ZVK1 233 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 RAB11FIP4Q86YS3 637 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 KLRG1Q96E93 195 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ZNF341Q9BYN7 854 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 MTMR4Q9NYA4 1195 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ORC3Q9UBD5 711 aaPredicted RBP14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 SLC12A7Q9Y666 1083 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 ELP1O95163 1332 aa14.5□□□□□ -0.09
SMAD3-204ENST00000540846 MYH6P13533 1939 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 GADD45BO75293 160 aaPredicted RBP14.49□□□□□ -0.09
SMAD3-204ENST00000540846 ITGBL1O95965 494 aaPredicted RBP14.49□□□□□ -0.09
SMAD3-204ENST00000540846 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
SMAD3-204ENST00000540846 INPP5BP32019 993 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 UBE2HP62256 183 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 SEPT2Q15019 361 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 CPLX2Q6PUV4 134 aaKnown RBP14.49□□□□□ -0.09
SMAD3-204ENST00000540846 DGKHQ86XP1 1220 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.49□□□□□ -0.096e-6■□□□□ 9
SMAD3-204ENST00000540846 FAM217BQ9NTX9 383 aaPredicted RBP14.49□□□□□ -0.09
SMAD3-204ENST00000540846 STK36Q9NRP7 1315 aa14.49□□□□□ -0.09
SMAD3-204ENST00000540846 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
SMAD3-204ENST00000540846 CDC27P30260 824 aa14.48□□□□□ -0.09
SMAD3-204ENST00000540846 ZNF445P59923 1031 aa14.48□□□□□ -0.09
SMAD3-204ENST00000540846 NTRK3Q16288 839 aa14.48□□□□□ -0.09
SMAD3-204ENST00000540846 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
SMAD3-204ENST00000540846 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
SMAD3-204ENST00000540846 GPBP1L1Q9HC44 474 aaPredicted RBP14.48□□□□□ -0.09
SMAD3-204ENST00000540846 GOLGA6L3A6NEY3 463 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 MPHOSPH10O00566 681 aaKnown RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 RXRAP19793 462 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 ADD1P35611 737 aaKnown RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 ZSCAN23Q3MJ62 389 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 NOL9Q5SY16 702 aaKnown RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 L1TD1Q5T7N2 865 aaKnown RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 C8orf76Q96K31 380 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 WRNIP1Q96S55 665 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 TMEM47Q9BQJ4 181 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 MYL10Q9BUA6 226 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 SCAND2PQ9GZW5 306 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 ASNSP08243 561 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 TROAPQ12815 778 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 RTN1Q16799 776 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 CCDC178Q5BJE1 867 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 IFIT1BQ5T764 474 aaKnown RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 FAM173BQ6P4H8 233 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 ZNF654Q8IZM8 581 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 ZKSCAN4Q969J2 545 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-204ENST00000540846 KANSL2Q9H9L4 492 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 TMEM63CQ9P1W3 806 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 NYAP2Q9P242 653 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 STX8Q9UNK0 236 aa14.47□□□□□ -0.09
SMAD3-204ENST00000540846 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 A0A1W2PRG0 241 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 TTLL1O95922 423 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 EEF2P13639 858 aaKnown RBP14.46□□□□□ -0.09
SMAD3-204ENST00000540846 IFNAR1P17181 557 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 FOSBP53539 338 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 ICA1Q05084 483 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 ATL3Q6DD88 541 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 MOB2Q70IA6 237 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-204ENST00000540846 SCYL3Q8IZE3 742 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 MKL1Q969V6 931 aa14.46□□□□□ -0.09
SMAD3-204ENST00000540846 SYAP1Q96A49 352 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms