RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MKRN1Q9UHC7 482 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 GJA3Q9Y6H8 435 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 CCDC175P0C221 793 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 MARCKSP29966 332 aaPredicted RBP5.9□□□□□ -1.46
PROM1-220ENST00000540805 TBX2Q13207 712 aaPredicted RBP5.9□□□□□ -1.46
PROM1-220ENST00000540805 PRKG1Q13976 671 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 LRRC24Q50LG9 513 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 KCNV1Q6PIU1 500 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 TTC16Q8NEE8 873 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 DESI2Q9BSY9 194 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 HELLSQ9NRZ9 838 aa5.9□□□□□ -1.46
PROM1-220ENST00000540805 PUF60Q9UHX1 559 aaKnown RBP5.9□□□□□ -1.46
PROM1-220ENST00000540805 POLD1P28340 1107 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 ADKP55263 362 aaKnown RBP5.9□□□□□ -1.47
PROM1-220ENST00000540805 TUBB4BP68371 445 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 TCIRG1Q13488 830 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 SPECC1LQ69YQ0 1117 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 LRRC31Q6UY01 552 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 BARGINQ6ZT62 677 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 DZIP3Q86Y13 1208 aaKnown RBP5.9□□□□□ -1.47
PROM1-220ENST00000540805 TC2NQ8N9U0 490 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 MSANTD4Q8NCY6 345 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 FAM71BQ8TC56 605 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 RIN2Q8WYP3 895 aaPredicted RBP5.9□□□□□ -1.47
PROM1-220ENST00000540805 CCDC102AQ96A19 550 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 DBNDD2Q9BQY9 259 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 ANKZF1Q9H8Y5 726 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 INTS13Q9NVM9 706 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 RAB21Q9UL25 225 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 SH3BP1Q9Y3L3 701 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 PALLDQ8WX93 1383 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 KIF28PB7ZC32 967 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 KIF5CO60282 957 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 KIF23Q02241 960 aaPredicted RBP5.9□□□□□ -1.47
PROM1-220ENST00000540805 ITPK1Q13572 414 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 TUBB2AQ13885 445 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 SLC39A14Q15043 492 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 GRIPAP1Q4V328 841 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 MSL1Q68DK7 614 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 PPM1EQ8WY54 764 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 JDP2Q8WYK2 163 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 TUBB2BQ9BVA1 445 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 PUS3Q9BZE2 481 aaKnown RBP5.9□□□□□ -1.47
PROM1-220ENST00000540805 CD248Q9HCU0 757 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 CDC23Q9UJX2 597 aa5.9□□□□□ -1.47
PROM1-220ENST00000540805 TNRC6CQ9HCJ0 1690 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 GOLGA8BA8MQT2 603 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 IFIT3O14879 490 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 APBA3O96018 575 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 KCNQ4P56696 695 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 FAM89AQ96GI7 184 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 BORCS6Q96GS4 357 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 TEX13AQ9BXU3 409 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 UBA5Q9GZZ9 404 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 MRPL44Q9H9J2 332 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 ABCB6Q9NP58 842 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 HPSEQ9Y251 543 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 ZBTB1Q9Y2K1 713 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 THRAP3Q9Y2W1 955 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 MAP3K15Q6ZN16 1313 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 KLF18A0A0U1RQI7 1052 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 TSPY2A6NKD2 308 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 TPTE2Q6XPS3 522 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 AMIGO3Q86WK7 504 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 IQCA1Q86XH1 822 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 CNNM3Q8NE01 707 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 VTI1AQ96AJ9 217 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 ZNF594Q96JF6 807 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 PNKPQ96T60 521 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 DACH1Q9UI36 760 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 L1RE1Q9UN81 338 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 ECM29Q5VYK3 1845 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 EME2A4GXA9 379 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 ZNF213O14771 459 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 PPP6R2O75170 966 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 HSPD1P10809 573 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 EIF5P55010 431 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 GSCP56915 257 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 CORO7P57737 925 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 SATB1Q01826 763 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 KIF4BQ2VIQ3 1234 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 CCDC102BQ68D86 513 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 MCTP2Q6DN12 878 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 GIGYF2Q6Y7W6 1299 aaKnown RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 MICU3Q86XE3 530 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 CTCFLQ8NI51 663 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 LZTFL1Q9NQ48 299 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
PROM1-220ENST00000540805 USP21Q9UK80 565 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 CDHR2Q9BYE9 1310 aa5.89□□□□□ -1.47
PROM1-220ENST00000540805 A0A0G2JLW4 131 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 AKR1B15C9JRZ8 316 aaPredicted RBP5.88□□□□□ -1.47
PROM1-220ENST00000540805 CIAO1O76071 339 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 RHOXF2BP0C7M4 288 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 CASP8Q14790 479 aa5.88□□□□□ -1.47
PROM1-220ENST00000540805 ENOX2Q16206 610 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms