RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 TYRO3Q06418 890 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 SF3B3Q15393 1217 aaKnown RBP6.9□□□□□ -1.3
SNHG1-207ENST00000537965 KANK3Q6NY19 840 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 TRPM4Q8TD43 1214 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 STK32AQ8WU08 396 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 ZC3H12CQ9C0D7 883 aaKnown RBP6.9□□□□□ -1.3
SNHG1-207ENST00000537965 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
SNHG1-207ENST00000537965 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.3
SNHG1-207ENST00000537965 YDJCA8MPS7 323 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 HOXB7P09629 217 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 IRS1P35568 1242 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 TMPOP42166 694 aaKnown RBP6.89□□□□□ -1.31
SNHG1-207ENST00000537965 PCBP4P57723 403 aaKnown RBP6.89□□□□□ -1.31
SNHG1-207ENST00000537965 RPS8P62241 208 aaKnown RBP6.89□□□□□ -1.31
SNHG1-207ENST00000537965 FKBP1BP68106 108 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 PKN2Q16513 984 aaKnown RBP6.89□□□□□ -1.31
SNHG1-207ENST00000537965 IER5Q5VY09 327 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 BTLAQ7Z6A9 289 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 FCHSD1Q86WN1 690 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 BTBD6Q96KE9 485 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 HYPKQ9NX55 129 aa6.89□□□□□ -1.31
SNHG1-207ENST00000537965 DBF4Q9UBU7 674 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-207ENST00000537965 PHF20L1A8MW92 1017 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 FAM155AB1AL88 458 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 ECE2O60344 883 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 TRPA1O75762 1119 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 ANXA1P04083 346 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 MMP14P50281 582 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 SNRPNP63162 240 aaKnown RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 KIF23Q02241 960 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 RALBP1Q15311 655 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 OCLNQ16625 522 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 PROSER3Q2NL68 480 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 TBC1D10BQ4KMP7 808 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 AGBL3Q8NEM8 1001 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 SLC30A3Q99726 388 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 DBNDD1Q9H9R9 158 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 DMGDHQ9UI17 866 aaKnown RBP6.88□□□□□ -1.31
SNHG1-207ENST00000537965 KCNH4Q9UQ05 1017 aa6.88□□□□□ -1.31
SNHG1-207ENST00000537965 PITPNM2Q9BZ72 1349 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 CHL1O00533 1208 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 IRS4O14654 1257 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-207ENST00000537965 SIN3BO75182 1162 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 GDF11O95390 407 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-207ENST00000537965 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
SNHG1-207ENST00000537965 SYT9Q86SS6 491 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 TBC1D16Q8TBP0 767 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 VTI1AQ96AJ9 217 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 FAM89AQ96GI7 184 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 MYO19Q96H55 970 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 ISCA1Q9BUE6 129 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 RNF186Q9NXI6 227 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 POLLQ9UGP5 575 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 PAPPA2Q9BXP8 1791 aa6.87□□□□□ -1.31
SNHG1-207ENST00000537965 DUOX1Q9NRD9 1551 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 ZNF609O15014 1411 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 PRMT3O60678 531 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 AMPD1P23109 780 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 NF2P35240 595 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 GPSM2P81274 684 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 FKBP5Q13451 457 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 ZBTB38Q8NAP3 1195 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CELF1Q92879 486 aaKnown RBP6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 MDFIQ99750 246 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 C1orf115Q9H7X2 142 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 GGA3Q9NZ52 723 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 KLK14Q9P0G3 267 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 CHPF2Q9P2E5 772 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
SNHG1-207ENST00000537965 LAS1LQ9Y4W2 734 aaKnown RBP6.86□□□□□ -1.31
SNHG1-207ENST00000537965 ECM29Q5VYK3 1845 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 SPEF2Q9C093 1822 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 XDHP47989 1333 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 SHTN1A0MZ66 631 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 ADARB2-AS1A8MUL3 147 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 PDE8AO60658 829 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 UFL1O94874 794 aa6.85□□□□□ -1.31
SNHG1-207ENST00000537965 DDX58O95786 925 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms