RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 GDAQ9Y2T3 454 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 ZSCAN12O43309 604 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 XBP1P17861 261 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 TRIM49BA6NDI0 452 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 SLFN14P0C7P3 912 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 FXR1P51114 621 aaKnown RBP eCLIP8.47□□□□□ -1.05
C11orf54-207ENST00000528288 DIXDC1Q155Q3 683 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 GRIK5Q16478 980 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 PPFIBP1Q86W92 1011 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 RASSF8Q8NHQ8 419 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 CTCFLQ8NI51 663 aaPredicted RBP8.47□□□□□ -1.05
C11orf54-207ENST00000528288 MTRQ99707 1265 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 GTPBP4Q9BZE4 634 aaKnown RBP8.47□□□□□ -1.05
C11orf54-207ENST00000528288 SAP30BPQ9UHR5 308 aaKnown RBP8.47□□□□□ -1.05
C11orf54-207ENST00000528288 DISP2A7MBM2 1401 aa8.47□□□□□ -1.05
C11orf54-207ENST00000528288 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 AKR1B15C9JRZ8 316 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 PRPF3O43395 683 aaKnown RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 TADA3O75528 432 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 H2AFXP16104 143 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 DHX8Q14562 1220 aaKnown RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 TMTC3Q6ZXV5 915 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 NSUN4Q96CB9 384 aaKnown RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 FHOD1Q9Y613 1164 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 MYH14Q7Z406 1995 aaKnown RBP8.46□□□□□ -1.05
C11orf54-207ENST00000528288 XDHP47989 1333 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 FAM205AQ6ZU69 1335 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 CHD4Q14839 1912 aa8.46□□□□□ -1.05
C11orf54-207ENST00000528288 GYS2P54840 703 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
C11orf54-207ENST00000528288 NT5DC1Q5TFE4 455 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 RTL9Q8NET4 1388 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 PNMA6AP0CW24 399 aaPredicted RBP8.46□□□□□ -1.06
C11orf54-207ENST00000528288 UTP14CQ5TAP6 766 aaKnown RBP8.46□□□□□ -1.06
C11orf54-207ENST00000528288 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 PHLPP2Q6ZVD8 1323 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 APTXQ7Z2E3 356 aaKnown RBP8.46□□□□□ -1.06
C11orf54-207ENST00000528288 CNTNAP5Q8WYK1 1306 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 ABCA3Q99758 1704 aa8.46□□□□□ -1.06
C11orf54-207ENST00000528288 N4BP3O15049 544 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 ERCC3P19447 782 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 TFAP4Q01664 338 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 SPATA1Q5VX52 437 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 ZNF579Q8NAF0 562 aaKnown RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 UIMC1Q96RL1 719 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 CICQ96RK0 1608 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 A0A1B0GTH6 734 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 PLA2G4AP47712 749 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 ZNF569Q5MCW4 686 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 TMCO3Q6UWJ1 677 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 VAT1LQ9HCJ6 419 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 BRMS1Q9HCU9 246 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 RNF216Q9NWF9 866 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 ZNF804BA4D1E1 1349 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 STX10O60499 249 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 SCG2P13521 617 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 HIBADHP31937 336 aaKnown RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 RPS8P62241 208 aaKnown RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 TERF2Q15554 542 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 AK7Q96M32 723 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 TRIM10Q9UDY6 481 aa8.45□□□□□ -1.06
C11orf54-207ENST00000528288 ADD3Q9UEY8 706 aaKnown RBP8.45□□□□□ -1.06
C11orf54-207ENST00000528288 MYH13Q9UKX3 1938 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 CCP110O43303 1012 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 SASH3O75995 380 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 KRT31Q15323 416 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 HEATR3Q7Z4Q2 680 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 NBPF5PQ86XG9 351 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-207ENST00000528288 TNFRSF25Q93038 417 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 TRERF1Q96PN7 1200 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-207ENST00000528288 TMEM60Q9H2L4 133 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 ANAPC4Q9UJX5 808 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 STX8Q9UNK0 236 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 ANKRD36CQ5JPF3 1778 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 SPATA31A1Q5TZJ5 1347 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 KDM4FA0A1W2PPD8 638 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 GYPCP04921 128 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 KCNJ6P48051 423 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
C11orf54-207ENST00000528288 UBE4AQ14139 1066 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 INF2Q27J81 1249 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 DZIP1Q86YF9 867 aaKnown RBP8.44□□□□□ -1.06
C11orf54-207ENST00000528288 SPATA20Q8TB22 786 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 NELFBQ8WX92 580 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 SLF1Q9BQI6 1058 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 MYH6P13533 1939 aa8.44□□□□□ -1.06
C11orf54-207ENST00000528288 USP5P45974 858 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms