RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 DEFB123Q8N688 67 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 SNIP1Q8TAD8 396 aaKnown RBP10.23□□□□□ -0.77
USP48-212ENST00000527823 FAM84BQ96KN1 310 aaPredicted RBP10.23□□□□□ -0.77
USP48-212ENST00000527823 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
USP48-212ENST00000527823 ZNF341Q9BYN7 854 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
USP48-212ENST00000527823 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
USP48-212ENST00000527823 ATRNL1Q5VV63 1379 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 J3QL48 77 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 HIBADHP31937 336 aaKnown RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 GRM5P41594 1212 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 FLT3LGP49771 235 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 UBE4AQ14139 1066 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 APOBEC3HQ6NTF7 200 aaKnown RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 GPAT2Q6NUI2 795 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 LMBR1LQ6UX01 489 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 C7orf61Q8IZ16 206 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 ZNF592Q92610 1267 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 TEKT1Q969V4 418 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 ZDHHC15Q96MV8 337 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 CNNM1Q9NRU3 951 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
USP48-212ENST00000527823 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 MYH2Q9UKX2 1941 aa10.22□□□□□ -0.77
USP48-212ENST00000527823 PIK3CDO00329 1044 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 ADCY3O60266 1144 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 FSHRP23945 695 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 BMP8BP34820 402 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PRR20EP86478 221 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PRR20CP86479 221 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PRR20DP86480 221 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PRR20BP86481 221 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PRR20AP86496 221 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 CHAF1AQ13111 956 aaPredicted RBP10.21□□□□□ -0.77
USP48-212ENST00000527823 LRIT3Q3SXY7 679 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 NOL9Q5SY16 702 aaKnown RBP10.21□□□□□ -0.77
USP48-212ENST00000527823 FKBP1CQ5VVH2 108 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 LDHAL6AQ6ZMR3 332 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
USP48-212ENST00000527823 CHMP4AQ9BY43 222 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 PUS3Q9BZE2 481 aaKnown RBP10.21□□□□□ -0.77
USP48-212ENST00000527823 MTMR10Q9NXD2 777 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 TMOD2Q9NZR1 351 aa10.21□□□□□ -0.77
USP48-212ENST00000527823 RFX7Q2KHR2 1363 aa10.21□□□□□ -0.78
USP48-212ENST00000527823 ADH1CP00326 375 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
USP48-212ENST00000527823 CCDC57Q2TAC2 916 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 TAF7LQ5H9L4 462 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 BEND3Q5T5X7 828 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 HOOK2Q96ED9 719 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 ZNF112Q9UJU3 913 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 WASF2Q9Y6W5 498 aa10.2□□□□□ -0.78
USP48-212ENST00000527823 A0A0G2JLL6 359 aaPredicted RBP10.19□□□□□ -0.78
USP48-212ENST00000527823 F6X3S4 739 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 TNPO2O14787 897 aaKnown RBP10.19□□□□□ -0.78
USP48-212ENST00000527823 SYN1P17600 705 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 NFIAQ12857 509 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 SLFNL1Q499Z3 407 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 PRRT2Q7Z6L0 340 aaPredicted RBP10.19□□□□□ -0.78
USP48-212ENST00000527823 FBXO33Q7Z6M2 555 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP48-212ENST00000527823 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 TBC1D22AQ8WUA7 517 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 UCN2Q96RP3 112 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP48-212ENST00000527823 SIPA1L1O43166 1804 aa10.19□□□□□ -0.78
USP48-212ENST00000527823 MAST3O60307 1309 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 ESPNB1AK53 854 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 GRM8O00222 908 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 TFRCP02786 760 aaKnown RBP10.18□□□□□ -0.78
USP48-212ENST00000527823 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
USP48-212ENST00000527823 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 VGLL2Q8N8G2 317 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 KAZALD1Q96I82 304 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 GUCD1Q96NT3 240 aa10.18□□□□□ -0.78
USP48-212ENST00000527823 PFASO15067 1338 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 MROH5Q6ZUA9 1318 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 RPTORQ8N122 1335 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 NR3C2P08235 984 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 SMPD1P17405 629 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 TCP10Q12799 353 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 TSGA10IPQ3SY00 556 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 PHTF2Q8N3S3 785 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 CCDC82Q8N4S0 544 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 FAM151AQ8WW52 585 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 SUCLG2Q96I99 432 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 DAGLAQ9Y4D2 1042 aa10.17□□□□□ -0.78
USP48-212ENST00000527823 CXCL11O14625 94 aa10.16□□□□□ -0.78
USP48-212ENST00000527823 CAPN2P17655 700 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms