RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 SEPT2Q15019 361 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 SH3D19Q5HYK7 790 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 PRRT2Q7Z6L0 340 aaPredicted RBP20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 IQCA1Q86XH1 822 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 SHISA4Q96DD7 197 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 KIAA1683Q9H0B3 1180 aa20.74■□□□□ 0.91
PACSIN3-202ENST00000524509 EVX2Q03828 476 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 KRT32Q14532 448 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 RALYLQ86SE5 291 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 NKX2-3Q8TAU0 364 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 DPF3Q92784 378 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 TCP11L1Q9NUJ3 509 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 SLC45A1Q9Y2W3 748 aa20.73■□□□□ 0.91
PACSIN3-202ENST00000524509 PLIN4Q96Q06 1357 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 BAZ2AQ9UIF9 1905 aaKnown RBP20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 TTLL1O95922 423 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 CYP21A2P08686 494 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 NECTIN1Q15223 517 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 C17orf99Q6UX52 265 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 ANKRD23Q86SG2 305 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 LPAR1Q92633 364 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 TTC14Q96N46 770 aa20.72■□□□□ 0.91
PACSIN3-202ENST00000524509 SIPA1L1O43166 1804 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 GUCY1A2P33402 732 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 MTFR1Q15390 333 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 NCOA7Q8NI08 942 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 GOPCQ9HD26 462 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 SRRDQ9UH36 339 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 PNMA3Q9UL41 463 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 TMX2Q9Y320 296 aa20.71■□□□□ 0.91
PACSIN3-202ENST00000524509 SMIM22K7EJ46 135 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 JAG1P78504 1218 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 MTMR2Q13614 643 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 CREB3L3Q68CJ9 461 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 UBE2Q1Q7Z7E8 422 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 TBC1D10CQ8IV04 446 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 C12orf42Q96LP6 360 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 DOCK1Q14185 1865 aa20.7■□□□□ 0.9
PACSIN3-202ENST00000524509 IGKV6D-41A0A0C4DH26 115 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 SLC27A2O14975 620 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 EEF2P13639 858 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 HOXD10P28358 340 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 CTGFP29279 349 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 PSMC4P43686 418 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 GJA8P48165 433 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 ATP2B2Q01814 1243 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 TSGA10IPQ3SY00 556 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 FAM47AQ5JRC9 791 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 GADL1Q6ZQY3 521 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 MKL1Q969V6 931 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 MTA3Q9BTC8 594 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 HTATIP2Q9BUP3 242 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 PRO3102Q9H379 93 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 AGTPBP1Q9UPW5 1226 aa20.69■□□□□ 0.9
PACSIN3-202ENST00000524509 ERICH2A1L162 156 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 E7EWF7 191 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 GJB1P08034 283 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 HMGB1P09429 215 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 OSBPP22059 807 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 GRK4P32298 578 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 HMGCS2P54868 508 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 DGKHQ86XP1 1220 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 TRIM47Q96LD4 638 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 NBPF3Q9H094 633 aa20.68■□□□□ 0.9
PACSIN3-202ENST00000524509 KDM4AO75164 1064 aa20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 RAET1EQ8TD07 263 aa20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 GTF3C2Q8WUA4 911 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 PARK7Q99497 189 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 CLIP2Q9UDT6 1046 aa20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 CPA4Q9UI42 421 aa20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 STX8Q9UNK0 236 aa20.67■□□□□ 0.9
PACSIN3-202ENST00000524509 B4E1Z4 1266 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 HOXA7P31268 230 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 HSPA4P34932 840 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 SHROOM1Q2M3G4 852 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 CCDC84Q86UT8 332 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 VCPKMTQ9H867 229 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 NR2E3Q9Y5X4 410 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 NEDD4P46934 1319 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 ADGRA2Q96PE1 1338 aa20.66■□□□□ 0.9
PACSIN3-202ENST00000524509 PDHXO00330 501 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 FMNL1O95466 1100 aaPredicted RBP20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 CCL5P13501 91 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 PSMA5P28066 241 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 MCM5P33992 734 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 NOVP48745 357 aa20.65■□□□□ 0.9
PACSIN3-202ENST00000524509 TMTC2Q8N394 836 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms