RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 RBM5P52756 815 aaKnown RBP eCLIP19.41■□□□□ 0.7
SREK1-212ENST00000522912 CACNB3P54284 484 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 UVSSAQ2YD98 709 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 GRIPAP1Q4V328 841 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 RILPL1Q5EBL4 403 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 EARS2Q5JPH6 523 aaKnown RBP19.41■□□□□ 0.7
SREK1-212ENST00000522912 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 CABP5Q9NP86 173 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 SERPINA10Q9UK55 444 aa19.41■□□□□ 0.7
SREK1-212ENST00000522912 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
SREK1-212ENST00000522912 SHMT1P34896 483 aa19.4■□□□□ 0.7
SREK1-212ENST00000522912 JMYQ8N9B5 988 aa19.4■□□□□ 0.7
SREK1-212ENST00000522912 TNFRSF25Q93038 417 aa19.4■□□□□ 0.7
SREK1-212ENST00000522912 PSMD1Q99460 953 aa19.4■□□□□ 0.7
SREK1-212ENST00000522912 FAM198AQ9UFP1 575 aa19.4■□□□□ 0.7
SREK1-212ENST00000522912 CYTH3O43739 400 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 SLURP2P0DP57 97 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 PDLIM2Q96JY6 352 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 SWAP70Q9UH65 585 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 PCDHB6Q9Y5E3 794 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 COL4A5P29400 1685 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 IGKV6D-41A0A0C4DH26 115 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 CTAGE5O15320 804 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 ZBTB7AO95365 584 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 GOLGA8HP0CJ92 632 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 SHC4Q6S5L8 630 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 CLIC6Q96NY7 704 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 IDI2Q9BXS1 227 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 MTMR4Q9NYA4 1195 aa19.39■□□□□ 0.69
SREK1-212ENST00000522912 GREB1LQ9C091 1923 aaPredicted RBP19.38■□□□□ 0.69
SREK1-212ENST00000522912 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
SREK1-212ENST00000522912 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
SREK1-212ENST00000522912 PFKFB1P16118 471 aa19.38■□□□□ 0.69
SREK1-212ENST00000522912 TCP10Q12799 353 aa19.38■□□□□ 0.69
SREK1-212ENST00000522912 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
SREK1-212ENST00000522912 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
SREK1-212ENST00000522912 ADAMTS3O15072 1205 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 SASS6Q6UVJ0 657 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 KLRF2D3W0D1 207 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 CUTAO60888 179 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 ATP2B1P20020 1258 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 NLRP5P59047 1200 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 SH3BP5LQ7L8J4 393 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 CLEC10AQ8IUN9 316 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 GPKOWQ92917 476 aaPredicted RBP eCLIP19.37■□□□□ 0.691e-6■□□□□ 10.9
SREK1-212ENST00000522912 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 EHD4Q9H223 541 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 BRMS1Q9HCU9 246 aa19.37■□□□□ 0.69
SREK1-212ENST00000522912 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
SREK1-212ENST00000522912 ZNF202O95125 648 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 PARP1P09874 1014 aaKnown RBP19.36■□□□□ 0.69
SREK1-212ENST00000522912 CFAP100Q494V2 611 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 ANO6Q4KMQ2 910 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 RESP18Q5W5W9 173 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 HPSEQ9Y251 543 aa19.36■□□□□ 0.69
SREK1-212ENST00000522912 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
SREK1-212ENST00000522912 FAM237AA0A1B0GTK4 181 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 LARGE2Q8N3Y3 721 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 KRI1Q8N9T8 703 aaKnown RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 TDRD3Q9H7E2 651 aaKnown RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 SH3GLB2Q9NR46 395 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 FBXO2Q9UK22 296 aaPredicted RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 USP17L5A8MUK1 530 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 WNT7AO00755 349 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 RAD17O75943 681 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 TYW1BQ6NUM6 668 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 FAM200AQ8TCP9 573 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 PRMT6Q96LA8 375 aaPredicted RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 SPZ1Q9BXG8 430 aa19.35■□□□□ 0.69
SREK1-212ENST00000522912 DHX36Q9H2U1 1008 aaKnown RBP19.35■□□□□ 0.69
SREK1-212ENST00000522912 PSMD14O00487 310 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 PTPREP23469 700 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
SREK1-212ENST00000522912 GRIN1Q05586 938 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 WWC2Q6AWC2 1192 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 RSBN1LQ6PCB5 846 aaPredicted RBP19.34■□□□□ 0.69
SREK1-212ENST00000522912 LRRC47Q8N1G4 583 aaKnown RBP19.34■□□□□ 0.69
SREK1-212ENST00000522912 ERCC4Q92889 916 aaPredicted RBP19.34■□□□□ 0.69
SREK1-212ENST00000522912 SDF4Q9BRK5 362 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 PDHBP11177 359 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 CLIP2Q9UDT6 1046 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 USP25Q9UHP3 1055 aa19.34■□□□□ 0.69
SREK1-212ENST00000522912 FAM196BA6NMK8 535 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 VIL1P09327 827 aaKnown RBP19.33■□□□□ 0.68
SREK1-212ENST00000522912 SYKP43405 635 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 TGFB2P61812 414 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 GMLQ99445 158 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 DNAJC25Q9H1X3 360 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 CBX8Q9HC52 389 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 PIM2Q9P1W9 311 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 PI4KBQ9UBF8 816 aa19.33■□□□□ 0.68
SREK1-212ENST00000522912 CEP131Q9UPN4 1083 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms