RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 BIRC3Q13489 604 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 SCARF1Q14162 830 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 ZNF460Q14592 562 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 NBPF1Q3BBV0 1214 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 CYB5RLQ6IPT4 315 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 KIAA1211LQ6NV74 962 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 LVRNQ6Q4G3 990 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 MEIOBQ8N635 442 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 USP7Q93009 1102 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 TTC17Q96AE7 1141 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 AIDAQ96BJ3 306 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 NLRP3Q96P20 1036 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
SKP1-209ENST00000522552 ZKSCAN3Q9BRR0 538 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 NLRC4Q9NPP4 1024 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 CRTAC1Q9NQ79 661 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 KLHL11Q9NVR0 708 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 ZDHHC3Q9NYG2 299 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 FBXO2Q9UK22 296 aaPredicted RBP4.95□□□□□ -1.62
SKP1-209ENST00000522552 RCAN3Q9UKA8 241 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 HDAC9Q9UKV0 1011 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 PNMA8BQ9ULN7 279 aaPredicted RBP4.95□□□□□ -1.62
SKP1-209ENST00000522552 DMTF1Q9Y222 760 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 RABGAP1Q9Y3P9 1069 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 TNPO3Q9Y5L0 923 aaKnown RBP4.95□□□□□ -1.62
SKP1-209ENST00000522552 SLC12A7Q9Y666 1083 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 DGKBQ9Y6T7 804 aa4.95□□□□□ -1.62
SKP1-209ENST00000522552 FRMPD2Q68DX3 1309 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 TRAV20A0A0B4J274 112 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 METTL12A8MUP2 240 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 UPP2O95045 317 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 ACRP10323 421 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 VDRP11473 427 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 BPIP17213 487 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 RRM1P23921 792 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 ECE1P42892 770 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 TOMM20Q15388 145 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 SPRED3Q2MJR0 410 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 ARHGAP29Q52LW3 1261 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 GPR158Q5T848 1215 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 CC2D1AQ6P1N0 951 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 UNC5AQ6ZN44 842 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 SCUBE1Q8IWY4 988 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 CBARPQ8N350 705 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 TMEM40Q8WWA1 233 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 KLHL6Q8WZ60 621 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 IFT22Q9H7X7 185 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 PHAXQ9H814 394 aaKnown RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 ZNF395Q9H8N7 513 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 DDX21Q9NR30 783 aaKnown RBP eCLIP4.94□□□□□ -1.62
SKP1-209ENST00000522552 SAGE1Q9NXZ1 904 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 GPN3Q9UHW5 284 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 EVLQ9UI08 416 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 ANKRD6Q9Y2G4 727 aa4.94□□□□□ -1.62
SKP1-209ENST00000522552 GPC6Q9Y625 555 aaPredicted RBP4.94□□□□□ -1.62
SKP1-209ENST00000522552 ABHD14A-ACY1A0A1B0GW23 586 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 AGRPO00253 132 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 ERC2O15083 957 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 SNUPNO95149 360 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 ACPPP15309 386 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 BMP6P22004 513 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 LPOP22079 712 aaPredicted RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 GTF2A2P52657 109 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 TERF1P54274 439 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 RPL6Q02878 288 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 GRB10Q13322 594 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 LRRFIP1Q32MZ4 808 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 C4orf17Q53FE4 359 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 TRIM61Q5EBN2 209 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 JAKMIP3Q5VZ66 844 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 SRLQ86TD4 932 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 CPA6Q8N4T0 437 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 TAB3Q8N5C8 712 aaPredicted RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 NKAPQ8N5F7 415 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 SNRNP27Q8WVK2 155 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 GAL3ST3Q96A11 431 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 KIFC2Q96AC6 838 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 FUBP3Q96I24 572 aaKnown RBP eCLIP4.93□□□□□ -1.62
SKP1-209ENST00000522552 TNIP3Q96KP6 325 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 TRIM47Q96LD4 638 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 LRGUKQ96M69 825 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 OSMRQ99650 979 aa4.93□□□□□ -1.62
SKP1-209ENST00000522552 SAP30BPQ9UHR5 308 aaKnown RBP4.93□□□□□ -1.62
SKP1-209ENST00000522552 FAM181BA6NEQ2 426 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PHF20L1A8MW92 1017 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 OPA1O60313 960 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 ZEB2O60315 1214 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PRKD3O94806 890 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 RHOBTB3O94955 611 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 AGR2O95994 175 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 ASGR2P07307 311 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 SETSIPP0DME0 302 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 MYBL2P10244 700 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 PYGMP11217 842 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 CCND1P24385 295 aa4.92□□□□□ -1.62
SKP1-209ENST00000522552 CALRP27797 417 aaKnown RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 GTF2E1P29083 439 aaPredicted RBP4.92□□□□□ -1.62
SKP1-209ENST00000522552 CYP2C19P33261 490 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms