RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ROBO3Q96MS0 1386 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 SPDYE16A6NNV3 312 aaPredicted RBP20.39■□□□□ 0.85
SQLE-205ENST00000521232 IGHDP01880 384 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 APPP05067 770 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 CLEC10AQ8IUN9 316 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 NUDT12Q9BQG2 462 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.39■□□□□ 0.85
SQLE-205ENST00000521232 UNC93B1Q9H1C4 597 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 VCPKMTQ9H867 229 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 MKNK2Q9HBH9 465 aa20.39■□□□□ 0.85
SQLE-205ENST00000521232 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
SQLE-205ENST00000521232 RLFQ13129 1914 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 XRCC5P13010 732 aaKnown RBP20.38■□□□□ 0.85
SQLE-205ENST00000521232 EEF2P13639 858 aaKnown RBP20.38■□□□□ 0.85
SQLE-205ENST00000521232 RASA1P20936 1047 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 TDO2P48775 406 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 CCNA1P78396 465 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 PRPF38BQ5VTL8 546 aaKnown RBP20.38■□□□□ 0.85
SQLE-205ENST00000521232 GPR142Q7Z601 462 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 PLEKHH3Q7Z736 793 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 TICAM2Q86XR7 235 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 CCAR1Q8IX12 1150 aaKnown RBP20.38■□□□□ 0.85
SQLE-205ENST00000521232 SOCS4Q8WXH5 440 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 USP6NLQ92738 828 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 SHISA4Q96DD7 197 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 LNPKQ9C0E8 428 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 BTBD7Q9P203 1132 aa20.38■□□□□ 0.85
SQLE-205ENST00000521232 CAPN2P17655 700 aa20.37■□□□□ 0.85
SQLE-205ENST00000521232 MORN1Q5T089 497 aa20.37■□□□□ 0.85
SQLE-205ENST00000521232 GREB1LQ9C091 1923 aaPredicted RBP20.37■□□□□ 0.85
SQLE-205ENST00000521232 SGPL1O95470 568 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 HMGCRP04035 888 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 CYP2B6P20813 491 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 B4GALNT3Q6L9W6 998 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 STK11IPQ8N1F8 1099 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 U2AF1L4Q8WU68 220 aaKnown RBP20.36■□□□□ 0.85
SQLE-205ENST00000521232 TANGO6Q9C0B7 1094 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 ZNF287Q9HBT7 754 aa20.36■□□□□ 0.85
SQLE-205ENST00000521232 PAK6Q9NQU5 681 aaPredicted RBP20.36■□□□□ 0.85
SQLE-205ENST00000521232 WDR46O15213 610 aaKnown RBP20.35■□□□□ 0.85
SQLE-205ENST00000521232 DSG3P32926 999 aa20.35■□□□□ 0.85
SQLE-205ENST00000521232 ATP2B2Q01814 1243 aa20.35■□□□□ 0.85
SQLE-205ENST00000521232 NUCB1Q02818 461 aa20.35■□□□□ 0.85
SQLE-205ENST00000521232 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
SQLE-205ENST00000521232 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
SQLE-205ENST00000521232 SPICE1Q8N0Z3 855 aa20.35■□□□□ 0.85
SQLE-205ENST00000521232 UBE2Q1Q7Z7E8 422 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
SQLE-205ENST00000521232 MB21D1Q8N884 522 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 TRIB2Q92519 343 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 NAPBQ9H115 298 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 NYAP2Q9P242 653 aa20.34■□□□□ 0.85
SQLE-205ENST00000521232 RPTORQ8N122 1335 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 IGKV6D-41A0A0C4DH26 115 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 FOXP2O15409 715 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 FLOT1O75955 427 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 PTPREP23469 700 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 RGS2P41220 211 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 TRIM32Q13049 653 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 CCDC129Q6ZRS4 1044 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 DEFB118Q96PH6 123 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 GOPCQ9HD26 462 aa20.33■□□□□ 0.85
SQLE-205ENST00000521232 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 PRDM1O75626 825 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 PDE4BQ07343 736 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 PPARAQ07869 468 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 MAP2K5Q13163 448 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 MAP3K21Q5TCX8 1036 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 PLEKHM2Q8IWE5 1019 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 SPATC1LQ9H0A9 340 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 CRISPLD2Q9H0B8 497 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.32■□□□□ 0.84
SQLE-205ENST00000521232 CWC22Q9HCG8 908 aaKnown RBP20.32■□□□□ 0.84
SQLE-205ENST00000521232 HMX1Q9NP08 348 aaPredicted RBP20.32■□□□□ 0.84
SQLE-205ENST00000521232 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
SQLE-205ENST00000521232 SLC3A2P08195 630 aaKnown RBP20.31■□□□□ 0.84
SQLE-205ENST00000521232 MCMDC2Q4G0Z9 681 aa20.31■□□□□ 0.84
SQLE-205ENST00000521232 SHCBP1Q8NEM2 672 aa20.31■□□□□ 0.84
SQLE-205ENST00000521232 MKL1Q969V6 931 aa20.31■□□□□ 0.84
SQLE-205ENST00000521232 MOV10L1Q9BXT6 1211 aaKnown RBP20.31■□□□□ 0.84
SQLE-205ENST00000521232 CEP290O15078 2479 aa20.31■□□□□ 0.84
SQLE-205ENST00000521232 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 STRNO43815 780 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 TFRCP02786 760 aaKnown RBP20.3■□□□□ 0.84
SQLE-205ENST00000521232 GRB14Q14449 540 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 ALX1Q15699 326 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 WDR78Q5VTH9 848 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 NEDD1Q8NHV4 660 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 ATG4CQ96DT6 458 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 FAM227BQ96M60 508 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 APBA2Q99767 749 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 MTMR4Q9NYA4 1195 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
SQLE-205ENST00000521232 IVNS1ABPQ9Y6Y0 642 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms