RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CYB5D2Q8WUJ1 264 aa6.47□□□□□ -1.37
HDAC2-208ENST00000520746 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
HDAC2-208ENST00000520746 ZNF552Q9H707 407 aaPredicted RBP6.47□□□□□ -1.37
HDAC2-208ENST00000520746 EBF1Q9UH73 591 aa6.47□□□□□ -1.37
HDAC2-208ENST00000520746 KCNH3Q9ULD8 1083 aa6.47□□□□□ -1.37
HDAC2-208ENST00000520746 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 LRRN2O75325 713 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 TFE3P19532 575 aaPredicted RBP6.46□□□□□ -1.38
HDAC2-208ENST00000520746 GNA15P30679 374 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 RPL6Q02878 288 aaKnown RBP6.46□□□□□ -1.38
HDAC2-208ENST00000520746 TSNAXIP1Q2TAA8 658 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 TMCO4Q5TGY1 634 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 DHX38Q92620 1227 aaKnown RBP6.46□□□□□ -1.38
HDAC2-208ENST00000520746 KCNC2Q96PR1 638 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 SGPP1Q9BX95 441 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 ZCCHC4Q9H5U6 513 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 CNOT6Q9ULM6 557 aaKnown RBP6.46□□□□□ -1.38
HDAC2-208ENST00000520746 CORINQ9Y5Q5 1042 aa6.46□□□□□ -1.38
HDAC2-208ENST00000520746 UPK3BL1B0FP48 263 aa6.45□□□□□ -1.38
HDAC2-208ENST00000520746 UPK3BL2E5RIL1 263 aa6.45□□□□□ -1.38
HDAC2-208ENST00000520746 RNF141Q8WVD5 230 aa6.45□□□□□ -1.38
HDAC2-208ENST00000520746 GPR160Q9UJ42 338 aa6.45□□□□□ -1.38
HDAC2-208ENST00000520746 PDE6BP35913 854 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 GALK1P51570 392 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 TEKQ02763 1124 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 CHRNEQ04844 493 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 CCDC27Q2M243 656 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 TMEM132EQ6IEE7 984 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 FAM13CQ8NE31 585 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 SHISA4Q96DD7 197 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 JAG2Q9Y219 1238 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 KCTD3Q9Y597 815 aa6.44□□□□□ -1.38
HDAC2-208ENST00000520746 PSPNO60542 156 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
HDAC2-208ENST00000520746 TRIM13O60858 407 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 PLCG1P19174 1290 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 SSPNQ14714 243 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 SNX17Q15036 470 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 TCERG1LQ5VWI1 586 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 SPPL2CQ8IUH8 684 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 ANKS4BQ8N8V4 417 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 JARID2Q92833 1246 aaPredicted RBP6.43□□□□□ -1.38
HDAC2-208ENST00000520746 RNF19AQ9NV58 838 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 PODXL2Q9NZ53 605 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 TLR6Q9Y2C9 796 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 AK5Q9Y6K8 562 aa6.43□□□□□ -1.38
HDAC2-208ENST00000520746 RBM47A0AV96 593 aaKnown RBP6.42□□□□□ -1.38
HDAC2-208ENST00000520746 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 EFEMP2O95967 443 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 DUSP4Q13115 394 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 ZNF385BQ569K4 471 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 MEI1Q5TIA1 1274 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 MARCH10Q8NA82 808 aaPredicted RBP6.42□□□□□ -1.38
HDAC2-208ENST00000520746 LINC01599Q8WXQ3 324 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
HDAC2-208ENST00000520746 G6PC3Q9BUM1 346 aa6.42□□□□□ -1.38
HDAC2-208ENST00000520746 NOTOA8MTQ0 251 aa6.41□□□□□ -1.38
HDAC2-208ENST00000520746 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
HDAC2-208ENST00000520746 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
HDAC2-208ENST00000520746 MFAP1P55081 439 aaKnown RBP6.41□□□□□ -1.38
HDAC2-208ENST00000520746 TMEM201Q5SNT2 666 aa6.41□□□□□ -1.38
HDAC2-208ENST00000520746 ZNF281Q9Y2X9 895 aa6.41□□□□□ -1.38
HDAC2-208ENST00000520746 RFXAPO00287 272 aa6.4□□□□□ -1.38
HDAC2-208ENST00000520746 NFIXQ14938 502 aa6.4□□□□□ -1.38
HDAC2-208ENST00000520746 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
HDAC2-208ENST00000520746 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
HDAC2-208ENST00000520746 KREMEN1Q96MU8 473 aa6.4□□□□□ -1.38
HDAC2-208ENST00000520746 OR14I1A6ND48 311 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 SYN1P17600 705 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 PI3P19957 117 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 BNC2Q6ZN30 1099 aaPredicted RBP6.39□□□□□ -1.39
HDAC2-208ENST00000520746 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 TMEM151BQ8IW70 566 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 SIRT2Q8IXJ6 389 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 RTEL1Q9NZ71 1219 aa6.39□□□□□ -1.39
HDAC2-208ENST00000520746 MBD1Q9UIS9 605 aaPredicted RBP6.39□□□□□ -1.39
HDAC2-208ENST00000520746 CILPO75339 1184 aa6.38□□□□□ -1.39
HDAC2-208ENST00000520746 TNNI2P48788 182 aa6.38□□□□□ -1.39
HDAC2-208ENST00000520746 ADGRF1Q5T601 910 aa6.38□□□□□ -1.39
HDAC2-208ENST00000520746 CCDC84Q86UT8 332 aaPredicted RBP6.38□□□□□ -1.39
HDAC2-208ENST00000520746 PANK1Q8TE04 598 aa6.38□□□□□ -1.39
HDAC2-208ENST00000520746 DUSP9Q99956 384 aaKnown RBP6.38□□□□□ -1.39
HDAC2-208ENST00000520746 FAM221AA4D161 298 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 ANKRD33BA6NCL7 494 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 USP2O75604 605 aaPredicted RBP6.37□□□□□ -1.39
HDAC2-208ENST00000520746 RLBP1P12271 317 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 CLEC16AQ2KHT3 1053 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 XYLT2Q9H1B5 865 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
HDAC2-208ENST00000520746 CCDC9Q9Y3X0 531 aaKnown RBP6.37□□□□□ -1.39
HDAC2-208ENST00000520746 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 CHURC1-FNTBB4DL54 471 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 HRKO00198 91 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 BPNT1O95861 308 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 EPHB3P54753 998 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
HDAC2-208ENST00000520746 SRSF3P84103 164 aaKnown RBP6.36□□□□□ -1.39
HDAC2-208ENST00000520746 DACT3Q96B18 629 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms