RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	GPAT2	Q6NUI2	795 aa		7.01	□□□□□ -1.29
CTNNA1-222	ENST00000520400	FAM181A	Q8N9Y4	354 aa		7.01	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DEPDC7	Q96QD5	511 aa		7.01	□□□□□ -1.29
CTNNA1-222	ENST00000520400	MINPP1	Q9UNW1	487 aa		7.01	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DYRK3	O43781	588 aa		7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	FST	P19883	344 aa		7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SPATC1	Q76KD6	591 aa		7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	JAZF1	Q86VZ6	243 aa		7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SHKBP1	Q8TBC3	707 aa		7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PHAX	Q9H814	394 aa	Known RBP	7	□□□□□ -1.29
CTNNA1-222	ENST00000520400	WASH4P	A8MWX3	477 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	WDR64	B1ANS9	1081 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DIAPH1	O60610	1272 aa	Known RBP	6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	EPHX1	P07099	455 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	H2AFB1	P0C5Y9	115 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	H2AFB2	P0C5Z0	115 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SLC7A5	Q01650	507 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	ZDHHC13	Q8IUH4	622 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	LILRB2	Q8N423	598 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	RNF141	Q8WVD5	230 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SRPK1	Q96SB4	655 aa	Known RBP	6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	KLHL25	Q9H0H3	589 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	APEX2	Q9UBZ4	518 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	ZNF451	Q9Y4E5	1061 aa		6.99	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SHISA3	A0PJX4	238 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PRR19	A6NJB7	356 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	MSTN	O14793	375 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	IGLV1-40	P01703	118 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	FURIN	P09958	794 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	NBPF9	Q3BBW0	867 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SOGA3	Q5TF21	947 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	TMC3	Q7Z5M5	1100 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	NLGN1	Q8N2Q7	840 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	MKL1	Q969V6	931 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	FGD4	Q96M96	766 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	FBXL18	Q96ME1	805 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	HAUS7	Q99871	368 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DBNDD2	Q9BQY9	259 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	CCDC113	Q9H0I3	377 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	TPX2	Q9ULW0	747 aa	Known RBP	6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PLAGL2	Q9UPG8	496 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SLC12A7	Q9Y666	1083 aa		6.98	□□□□□ -1.29
CTNNA1-222	ENST00000520400	LOC100996750	A0A140TA64	210 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PDPK1	O15530	556 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SUSD5	O60279	629 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	CBX7	O95931	251 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	HOXA10	P31260	410 aa	Predicted RBP	6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	OXCT1	P55809	520 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	TNK2	Q07912	1038 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	NKPD1	Q17RQ9	610 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	SLC10A6	Q3KNW5	377 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DTWD2	Q8NBA8	298 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	DNAJC7	Q99615	494 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	KRTAP4-6	Q9BYQ5	205 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PRDM14	Q9GZV8	571 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	PRDM5	Q9NQX1	630 aa	Predicted RBP	6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	TBX22	Q9Y458	520 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	CAPN6	Q9Y6Q1	641 aa		6.97	□□□□□ -1.29
CTNNA1-222	ENST00000520400	TBX1	O43435	398 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ETV3	P41162	512 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	AUH	Q13825	339 aa	Known RBP	6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	RASGRF1	Q13972	1273 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	SFRP5	Q5T4F7	317 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	CCDC144CP	Q8IYA2	1237 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	DHRS1	Q96LJ7	313 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	MKRN2	Q9H000	416 aa	Known RBP	6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	PFDN2	Q9UHV9	154 aa		6.96	□□□□□ -1.3
CTNNA1-222	ENST00000520400	U2SURP	O15042	1029 aa	Known RBP	6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	NCAPH	Q15003	741 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	SPACA3	Q8IXA5	215 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	C7orf61	Q8IZ16	206 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ASPN	Q9BXN1	380 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	GP6	Q9HCN6	339 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ZMYM5	Q9UJ78	669 aa		6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	MRPL42	Q9Y6G3	142 aa	Known RBP	6.95	□□□□□ -1.3
CTNNA1-222	ENST00000520400	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	SMARCA5	O60264	1052 aa	Predicted RBP	6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	CAPNS1	P04632	268 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ITIH2	P19823	946 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	CD247	P20963	164 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ZNF445	P59923	1031 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	C22orf34	Q6ZV56	151 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	PLD6	Q8N2A8	252 aa	Known RBP	6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ADCY4	Q8NFM4	1077 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	BRF1	Q92994	677 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	RNPC3	Q96LT9	517 aa	Known RBP	6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	GFOD1	Q9NXC2	390 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ST14	Q9Y5Y6	855 aa		6.94	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ADCY3	O60266	1144 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	TGFB1	P01137	390 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ANKRD39	Q53RE8	183 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	PRSS36	Q5K4E3	855 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	FOXB2	Q5VYV0	432 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	LRRC4C	Q9HCJ2	640 aa		6.93	□□□□□ -1.3
CTNNA1-222	ENST00000520400	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms