RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CYB5D2Q8WUJ1 264 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 RNF141Q8WVD5 230 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 LINC01599Q8WXQ3 324 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 MIR1-1HGQ9H1L0 117 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 EBF1Q9UH73 591 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 ZNF281Q9Y2X9 895 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 KCTD3Q9Y597 815 aa3.55□□□□□ -1.84
CCNC-208ENST00000519617 RBM47A0AV96 593 aaKnown RBP3.54□□□□□ -1.84
CCNC-208ENST00000519617 TFE3P19532 575 aaPredicted RBP3.54□□□□□ -1.84
CCNC-208ENST00000519617 EIF4BP23588 611 aaKnown RBP3.54□□□□□ -1.84
CCNC-208ENST00000519617 LTKP29376 864 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 GNA15P30679 374 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 LIG3P49916 1009 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 TEKQ02763 1124 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 TMEM132EQ6IEE7 984 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 ANKS4BQ8N8V4 417 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 SYTL4Q96C24 671 aaPredicted RBP3.54□□□□□ -1.84
CCNC-208ENST00000519617 SGPP1Q9BX95 441 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 RTEL1Q9NZ71 1219 aa3.54□□□□□ -1.84
CCNC-208ENST00000519617 NOTOA8MTQ0 251 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 UPK3BL1B0FP48 263 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 UPK3BL2E5RIL1 263 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 HRKO00198 91 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 RFXAPO00287 272 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 PSPNO60542 156 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 TRIM13O60858 407 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 LRRN2O75325 713 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 LDHBP07195 334 aaKnown RBP3.53□□□□□ -1.84
CCNC-208ENST00000519617 P4HBP07237 508 aaKnown RBP3.53□□□□□ -1.84
CCNC-208ENST00000519617 RLBP1P12271 317 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 SYN1P17600 705 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 PDE6BP35913 854 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 YARSP54577 528 aaKnown RBP3.53□□□□□ -1.84
CCNC-208ENST00000519617 DUSP4Q13115 394 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 NFIXQ14938 502 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 TMEM201Q5SNT2 666 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 DBX2Q6ZNG2 339 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 CCDC84Q86UT8 332 aaPredicted RBP3.53□□□□□ -1.84
CCNC-208ENST00000519617 SLFN12Q8IYM2 578 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 CXorf38Q8TB03 319 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 G6PC3Q9BUM1 346 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 GPR160Q9UJ42 338 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 CORINQ9Y5Q5 1042 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 AK5Q9Y6K8 562 aa3.53□□□□□ -1.84
CCNC-208ENST00000519617 OR14I1A6ND48 311 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 PLCG1P19174 1290 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 SSPNQ14714 243 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 MAP3K11Q16584 847 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 NLRX1Q86UT6 975 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 FAM13CQ8NE31 585 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 DACT3Q96B18 629 aaPredicted RBP3.52□□□□□ -1.85
CCNC-208ENST00000519617 SIGLEC10Q96LC7 697 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 ASPNQ9BXN1 380 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 XYLT2Q9H1B5 865 aa3.52□□□□□ -1.85
CCNC-208ENST00000519617 PRR36Q9H6K5 1346 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 SHISA3A0PJX4 238 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 PRPF40AO75400 957 aaKnown RBP3.51□□□□□ -1.85
CCNC-208ENST00000519617 SASH1O94885 1247 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 C14orf37Q86TY3 774 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 ENOX1Q8TC92 643 aaKnown RBP3.51□□□□□ -1.85
CCNC-208ENST00000519617 PANK1Q8TE04 598 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 JARID2Q92833 1246 aaPredicted RBP3.51□□□□□ -1.85
CCNC-208ENST00000519617 VWCEQ96DN2 955 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 KREMEN1Q96MU8 473 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 CRTAC1Q9NQ79 661 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 MBD1Q9UIS9 605 aaPredicted RBP3.51□□□□□ -1.85
CCNC-208ENST00000519617 IRAK3Q9Y616 596 aa3.51□□□□□ -1.85
CCNC-208ENST00000519617 FAM221AA4D161 298 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 NRDCO43847 1150 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 CILPO75339 1184 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 EFEMP2O95967 443 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 PI3P19957 117 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 KIR2DL1P43626 348 aaPredicted RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 KIR2DL2P43627 348 aaPredicted RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 GALK1P51570 392 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 KRTAP10-2P60368 255 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 YBX1P67809 324 aaKnown RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 SRSF3P84103 164 aaKnown RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 SKOR2Q2VWA4 1001 aaPredicted RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 ADGRF1Q5T601 910 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 DIEXFQ68CQ4 756 aaKnown RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 RNF111Q6ZNA4 994 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 USHBP1Q8N6Y0 703 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 PHC3Q8NDX5 983 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 CCDC74BQ96LY2 380 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 ARID3AQ99856 593 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 NOC4LQ9BVI4 516 aaKnown RBP3.5□□□□□ -1.85
CCNC-208ENST00000519617 CNTD2Q9H8S5 307 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 TLR6Q9Y2C9 796 aa3.5□□□□□ -1.85
CCNC-208ENST00000519617 OTOL1A6NHN0 477 aaPredicted RBP3.49□□□□□ -1.85
CCNC-208ENST00000519617 CHURC1-FNTBB4DL54 471 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 N4BP3O15049 544 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 TNNI2P48788 182 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 ST13P50502 369 aaKnown RBP3.49□□□□□ -1.85
CCNC-208ENST00000519617 AFF3P51826 1226 aaKnown RBP3.49□□□□□ -1.85
CCNC-208ENST00000519617 CLEC16AQ2KHT3 1053 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 MEI1Q5TIA1 1274 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 SIRT2Q8IXJ6 389 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 DAGLBQ8NCG7 672 aa3.49□□□□□ -1.85
CCNC-208ENST00000519617 SYTL5Q8TDW5 730 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms