RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 RNF181Q9P0P0 153 aa11.61□□□□□ -0.55
MCPH1-203ENST00000519480 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
MCPH1-203ENST00000519480 MYH6P13533 1939 aa11.61□□□□□ -0.55
MCPH1-203ENST00000519480 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
MCPH1-203ENST00000519480 VEGFAP15692 232 aaPredicted RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 SBF1O95248 1867 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 DDNO94850 711 aaPredicted RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 LMNB1P20700 586 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 ISY1Q9ULR0 285 aaKnown RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 KCNJ14Q9UNX9 436 aa11.6□□□□□ -0.55
MCPH1-203ENST00000519480 V9GY48 417 aaPredicted RBP11.6□□□□□ -0.55
MCPH1-203ENST00000519480 TRAK2O60296 914 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 CTCFLQ8NI51 663 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 FZD1Q9UP38 647 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 CDKL5O76039 1030 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 IFNAR1P17181 557 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 EPS15P42566 896 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 CERKLQ49MI3 558 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 CCDC84Q86UT8 332 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 KIF28PB7ZC32 967 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 MYO1BO43795 1136 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
MCPH1-203ENST00000519480 RESTQ13127 1097 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 SEPT2Q15019 361 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 USP48Q86UV5 1035 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 MTA3Q9BTC8 594 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 LMBRD1Q9NUN5 540 aa11.59□□□□□ -0.55
MCPH1-203ENST00000519480 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 ENTPD3O75355 529 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 RASA3Q14644 834 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 GPR162Q16538 588 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.58□□□□□ -0.56
MCPH1-203ENST00000519480 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 DDAH1O94760 285 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 KIF4BQ2VIQ3 1234 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 C9orf131Q5VYM1 1079 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 KRT40Q6A162 431 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 UBA5Q9GZZ9 404 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 SWAP70Q9UH65 585 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
MCPH1-203ENST00000519480 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 GH2P01242 217 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 FUT2Q10981 343 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 FAM151AQ8WW52 585 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 ZBED3Q96IU2 234 aaPredicted RBP11.57□□□□□ -0.56
MCPH1-203ENST00000519480 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 AKAP17AQ02040 695 aaKnown RBP11.57□□□□□ -0.56
MCPH1-203ENST00000519480 EHD4Q9H223 541 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
MCPH1-203ENST00000519480 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
MCPH1-203ENST00000519480 POLR2AP24928 1970 aaKnown RBP11.57□□□□□ -0.56
MCPH1-203ENST00000519480 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 CNTNAP5Q8WYK1 1306 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 H7C1D1 291 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 CALM1P0DP23 149 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 CALM2P0DP24 149 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 CALM3P0DP25 149 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 EEF2P13639 858 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 RPS12P25398 132 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 PKN1Q16512 942 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 ANGEL2Q5VTE6 544 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 FOXP4Q8IVH2 680 aaPredicted RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 NID2Q14112 1375 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 ADAMTS3O15072 1205 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 CYTH3O43739 400 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 GNL2Q13823 731 aaKnown RBP11.56□□□□□ -0.56
MCPH1-203ENST00000519480 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
MCPH1-203ENST00000519480 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms