RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
CSGALNACT1-204ENST00000517494 A0A1W2PRG0 241 aa18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 PDE6AP16499 860 aa18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 RTP1P59025 263 aa18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SDR42E1Q8WUS8 393 aa18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 PRDM5Q9NQX1 630 aaPredicted RBP18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ZNF532Q9HCE3 1301 aa18.45■□□□□ 0.54
CSGALNACT1-204ENST00000517494 KBTBD13C9JR72 458 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 GOLIM4O00461 696 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 CYP2D6P10635 497 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 CYBAP13498 195 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ERCC3P19447 782 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 COG2Q14746 738 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 TMED8Q6PL24 325 aaPredicted RBP18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 CLEC10AQ8IUN9 316 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SPATC1LQ9H0A9 340 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 HOXC10Q9NYD6 342 aa18.44■□□□□ 0.54
CSGALNACT1-204ENST00000517494 GABPAQ06546 454 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 LCORLQ8N3X6 602 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ARRDC4Q8NCT1 418 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
CSGALNACT1-204ENST00000517494 FLOT1O75955 427 aa18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 TMEM179Q6ZVK1 233 aa18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ARMT1Q9H993 441 aa18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 DCP1AQ9NPI6 582 aaPredicted RBP18.42■□□□□ 0.54
CSGALNACT1-204ENST00000517494 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 STRNO43815 780 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 COBLO75128 1261 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ICA1Q05084 483 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 KIAA1755Q5JYT7 1200 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 PRAMEF19Q5SWL8 479 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 OLFML2BQ68BL8 750 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ATG4CQ96DT6 458 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ARHGEF10LQ9HCE6 1279 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SLC5A4Q9NY91 659 aa18.41■□□□□ 0.54
CSGALNACT1-204ENST00000517494 FRMPD3Q5JV73 1810 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 RAD21O60216 631 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 TRIM60Q495X7 471 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 ZNF697Q5TEC3 545 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SHCBP1Q8NEM2 672 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
CSGALNACT1-204ENST00000517494 SEPT4O43236 478 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PRKAB2O43741 272 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 MBD4O95243 580 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 AKR1B1P15121 316 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 DSG3P32926 999 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SLC39A5Q6ZMH5 540 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 MB21D1Q8N884 522 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 GUCD1Q96NT3 240 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 MROH8Q9H579 483 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SH2D4AQ9H788 454 aa18.39■□□□□ 0.53
CSGALNACT1-204ENST00000517494 TCRBV5S4A2TA0A5A2 114 aa18.38■□□□□ 0.53
CSGALNACT1-204ENST00000517494 ADCYAP1R1P41586 468 aa18.38■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SLFNL1Q499Z3 407 aa18.38■□□□□ 0.53
CSGALNACT1-204ENST00000517494 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
CSGALNACT1-204ENST00000517494 KIF1BPQ96EK5 621 aa18.38■□□□□ 0.53
CSGALNACT1-204ENST00000517494 CYP2D7A0A087X1C5 515 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 POTEB2H3BUK9 544 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 IGHA2P01877 340 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 FCER1AP12319 257 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SHHQ15465 462 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 FAM47AQ5JRC9 791 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 FAM109BQ6ICB4 259 aaPredicted RBP18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 BADQ92934 168 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PAG1Q9NWQ8 432 aa18.37■□□□□ 0.53
CSGALNACT1-204ENST00000517494 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 LRRC41Q15345 812 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 MMP19Q99542 508 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
CSGALNACT1-204ENST00000517494 UNC80Q8N2C7 3258 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SMIM22K7EJ46 135 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 HMMRO75330 724 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PGK2P07205 417 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 TMEM132BQ14DG7 1078 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 ABRAQ8N0Z2 381 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 PDLIM7Q9NR12 457 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 ATP8A2Q9NTI2 1148 aa18.35■□□□□ 0.53
CSGALNACT1-204ENST00000517494 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms