RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SH2D4AQ9H788 454 aa27.55■■■□□ 2
CLDND1-230ENST00000514537 ROBO3Q96MS0 1386 aa27.55■■■□□ 2
CLDND1-230ENST00000514537 SPDYE16A6NNV3 312 aaPredicted RBP27.54■■■□□ 2
CLDND1-230ENST00000514537 EEF2P13639 858 aaKnown RBP27.54■■■□□ 2
CLDND1-230ENST00000514537 RASA1P20936 1047 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 COG2Q14746 738 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 B4GALNT3Q6L9W6 998 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 NKX2-3Q8TAU0 364 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 NACAP1Q9BZK3 213 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 UNC93B1Q9H1C4 597 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 VCPKMTQ9H867 229 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 MKNK2Q9HBH9 465 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 HOXC10Q9NYD6 342 aa27.54■■■□□ 2
CLDND1-230ENST00000514537 GJA8P48165 433 aa27.53■■■□□ 2
CLDND1-230ENST00000514537 STK11IPQ8N1F8 1099 aa27.53■■■□□ 2
CLDND1-230ENST00000514537 NUDT12Q9BQG2 462 aa27.53■■■□□ 2
CLDND1-230ENST00000514537 BTBD7Q9P203 1132 aa27.53■■■□□ 2
CLDND1-230ENST00000514537 CCNA1P78396 465 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 NUCB1Q02818 461 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 GPR142Q7Z601 462 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 CHD1LQ86WJ1 897 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 CCAR1Q8IX12 1150 aaKnown RBP27.52■■■□□ 2
CLDND1-230ENST00000514537 SOCS4Q8WXH5 440 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 SHISA4Q96DD7 197 aa27.52■■■□□ 2
CLDND1-230ENST00000514537 PLEKHH3Q7Z736 793 aa27.51■■□□□ 1.99
CLDND1-230ENST00000514537 TICAM2Q86XR7 235 aa27.51■■□□□ 1.99
CLDND1-230ENST00000514537 SPICE1Q8N0Z3 855 aa27.51■■□□□ 1.99
CLDND1-230ENST00000514537 USP6NLQ92738 828 aa27.51■■□□□ 1.99
CLDND1-230ENST00000514537 TANGO6Q9C0B7 1094 aa27.51■■□□□ 1.99
CLDND1-230ENST00000514537 XRCC5P13010 732 aaKnown RBP27.5■■□□□ 1.99
CLDND1-230ENST00000514537 CYP2B6P20813 491 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 ATP2B2Q01814 1243 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 MORN1Q5T089 497 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 CCDC129Q6ZRS4 1044 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 NAPBQ9H115 298 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 ZNF287Q9HBT7 754 aa27.5■■□□□ 1.99
CLDND1-230ENST00000514537 WDR46O15213 610 aaKnown RBP27.49■■□□□ 1.99
CLDND1-230ENST00000514537 FOXP2O15409 715 aa27.49■■□□□ 1.99
CLDND1-230ENST00000514537 HMGCRP04035 888 aa27.49■■□□□ 1.99
CLDND1-230ENST00000514537 DSG3P32926 999 aa27.49■■□□□ 1.99
CLDND1-230ENST00000514537 HELLSQ9NRZ9 838 aa27.49■■□□□ 1.99
CLDND1-230ENST00000514537 PRPF38BQ5VTL8 546 aaKnown RBP27.48■■□□□ 1.99
CLDND1-230ENST00000514537 PLEKHM2Q8IWE5 1019 aa27.48■■□□□ 1.99
CLDND1-230ENST00000514537 ZNF444Q8N0Y2 327 aaPredicted RBP27.48■■□□□ 1.99
CLDND1-230ENST00000514537 U2AF1L4Q8WU68 220 aaKnown RBP27.48■■□□□ 1.99
CLDND1-230ENST00000514537 OSBPL3Q9H4L5 887 aa27.48■■□□□ 1.99
CLDND1-230ENST00000514537 PAK6Q9NQU5 681 aaPredicted RBP27.48■■□□□ 1.99
CLDND1-230ENST00000514537 PRDM1O75626 825 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 SGPL1O95470 568 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 TRIB2Q92519 343 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 GOPCQ9HD26 462 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 NYAP2Q9P242 653 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 MYH8P13535 1937 aa27.47■■□□□ 1.99
CLDND1-230ENST00000514537 IGKV6D-41A0A0C4DH26 115 aa27.46■■□□□ 1.99
CLDND1-230ENST00000514537 FLOT1O75955 427 aa27.46■■□□□ 1.99
CLDND1-230ENST00000514537 RGS2P41220 211 aa27.46■■□□□ 1.99
CLDND1-230ENST00000514537 PPARAQ07869 468 aa27.46■■□□□ 1.99
CLDND1-230ENST00000514537 MB21D1Q8N884 522 aa27.46■■□□□ 1.99
CLDND1-230ENST00000514537 CWC22Q9HCG8 908 aaKnown RBP27.46■■□□□ 1.99
CLDND1-230ENST00000514537 SLC3A2P08195 630 aaKnown RBP27.45■■□□□ 1.98
CLDND1-230ENST00000514537 PTPREP23469 700 aa27.45■■□□□ 1.98
CLDND1-230ENST00000514537 PDE4BQ07343 736 aa27.45■■□□□ 1.98
CLDND1-230ENST00000514537 TRIM32Q13049 653 aa27.45■■□□□ 1.98
CLDND1-230ENST00000514537 VPS53Q5VIR6 699 aa27.45■■□□□ 1.98
CLDND1-230ENST00000514537 TRMT44Q8IYL2 757 aaKnown RBP27.45■■□□□ 1.98
CLDND1-230ENST00000514537 FAM227BQ96M60 508 aa27.45■■□□□ 1.98
CLDND1-230ENST00000514537 TRIM6-TRIM34B2RNG4 842 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 CAPN2P17655 700 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 MAP2K5Q13163 448 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 MCMDC2Q4G0Z9 681 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 ATG4CQ96DT6 458 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 DEFB118Q96PH6 123 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 MOV10L1Q9BXT6 1211 aaKnown RBP27.44■■□□□ 1.98
CLDND1-230ENST00000514537 SPATC1LQ9H0A9 340 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 PLXNB2O15031 1838 aa27.44■■□□□ 1.98
CLDND1-230ENST00000514537 RPTORQ8N122 1335 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 A0A0D9SFI3 127 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 SLC15A5A6NIM6 579 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 MAP3K21Q5TCX8 1036 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 WDR78Q5VTH9 848 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 UBE2Q1Q7Z7E8 422 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.43■■□□□ 1.98
CLDND1-230ENST00000514537 ADAMTS5Q9UNA0 930 aa27.43■■□□□ 1.98
CLDND1-230ENST00000514537 ALX1Q15699 326 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 SHCBP1Q8NEM2 672 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 NEDD1Q8NHV4 660 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 MKL1Q969V6 931 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 RILPL2Q969X0 211 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 APBA2Q99767 749 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 CRISPLD2Q9H0B8 497 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 HMX1Q9NP08 348 aaPredicted RBP27.42■■□□□ 1.98
CLDND1-230ENST00000514537 MTMR4Q9NYA4 1195 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 CLIP2Q9UDT6 1046 aa27.42■■□□□ 1.98
CLDND1-230ENST00000514537 GREB1LQ9C091 1923 aaPredicted RBP27.41■■□□□ 1.98
CLDND1-230ENST00000514537 F5H6K3 240 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 RAD21O60216 631 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 ZKSCAN1P17029 563 aaPredicted RBP27.41■■□□□ 1.98
CLDND1-230ENST00000514537 KLRC3Q07444 240 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 GRB14Q14449 540 aa27.41■■□□□ 1.98
CLDND1-230ENST00000514537 FAM83BQ5T0W9 1011 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms