RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 SYMPKQ92797 1274 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 ANKIB1Q9P2G1 1089 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDR1-271ENST00000513240 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
DDR1-271ENST00000513240 PARP10Q53GL7 1025 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 UBXN4Q92575 508 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 ITGB4P16144 1822 aa16.67■□□□□ 0.26
DDR1-271ENST00000513240 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 FANCGO15287 622 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 CATIPQ7Z7H3 387 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
DDR1-271ENST00000513240 TUBE1Q9UJT0 475 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 NFIXQ14938 502 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 L2HGDHQ9H9P8 463 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 NUP98P52948 1817 aa16.66■□□□□ 0.26
DDR1-271ENST00000513240 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 PTPREP23469 700 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 CCT6AP40227 531 aaKnown RBP16.65■□□□□ 0.26
DDR1-271ENST00000513240 MDM2Q00987 491 aaPredicted RBP16.65■□□□□ 0.26
DDR1-271ENST00000513240 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 CEP83Q9Y592 693 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
DDR1-271ENST00000513240 TFRCP02786 760 aaKnown RBP16.65■□□□□ 0.26
DDR1-271ENST00000513240 NLRP5P59047 1200 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 PTGDRQ13258 359 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDR1-271ENST00000513240 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
DDR1-271ENST00000513240 AK7Q96M32 723 aa16.65■□□□□ 0.26
DDR1-271ENST00000513240 URI1O94763 535 aaPredicted RBP16.64■□□□□ 0.25
DDR1-271ENST00000513240 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 CCDC172P0C7W6 258 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
DDR1-271ENST00000513240 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
DDR1-271ENST00000513240 TOGARAM2Q6ZUX3 1019 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
DDR1-271ENST00000513240 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 IQCA1Q86XH1 822 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 RNF41Q9H4P4 317 aaPredicted RBP16.64■□□□□ 0.25
DDR1-271ENST00000513240 ADAM21Q9UKJ8 722 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
DDR1-271ENST00000513240 ERCC3P19447 782 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 MAPKAPK5Q8IW41 473 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 NLRP3Q96P20 1036 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 DCP1AQ9NPI6 582 aaPredicted RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 ZNF652Q9Y2D9 606 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 GNAT2P19087 354 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 TFAP4Q01664 338 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 TROAPQ12815 778 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 DPYDQ12882 1025 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 LRP6O75581 1613 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 ZPR1O75312 459 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 KRT2P35908 639 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 DNAJC21Q5F1R6 531 aaKnown RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 WASF1Q92558 559 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.63■□□□□ 0.25
DDR1-271ENST00000513240 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 STRCQ7RTU9 1775 aa16.63■□□□□ 0.25
DDR1-271ENST00000513240 ABCC6O95255 1503 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 ACTN4O43707 911 aaKnown RBP16.62■□□□□ 0.25
DDR1-271ENST00000513240 USP5P45974 858 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 GSDMDP57764 484 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 MNS1Q8NEH6 495 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 SH3RF3Q8TEJ3 882 aaPredicted RBP16.62■□□□□ 0.25
DDR1-271ENST00000513240 UBXN6Q9BZV1 441 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 F8W031 263 aaPredicted RBP16.62■□□□□ 0.25
DDR1-271ENST00000513240 ACTN2P35609 894 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 MAGEA9P43362 315 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
DDR1-271ENST00000513240 ATRNO75882 1429 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 EIF3CLB5ME19 914 aaKnown RBP16.61■□□□□ 0.25
DDR1-271ENST00000513240 EIF6P56537 245 aaKnown RBP16.61■□□□□ 0.25
DDR1-271ENST00000513240 FUT2Q10981 343 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 IL17AQ16552 155 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 RASSF8Q8NHQ8 419 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 EIF3CQ99613 913 aaKnown RBP16.61■□□□□ 0.25
DDR1-271ENST00000513240 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
DDR1-271ENST00000513240 NEMFO60524 1076 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
DDR1-271ENST00000513240 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 CXorf56Q9H5V9 222 aa16.61■□□□□ 0.25
DDR1-271ENST00000513240 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
DDR1-271ENST00000513240 SOWAHDA6NJG2 315 aa16.6■□□□□ 0.25
DDR1-271ENST00000513240 H3BQF6 201 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms