RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
MATR3-235ENST00000506147 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
MATR3-235ENST00000506147 MAP2K1Q02750 393 aaPredicted RBP18.53■□□□□ 0.56
MATR3-235ENST00000506147 CUL4AQ13619 759 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.53■□□□□ 0.56
MATR3-235ENST00000506147 SIAH1Q8IUQ4 282 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
MATR3-235ENST00000506147 SENP2Q9HC62 589 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 CSADQ9Y600 493 aa18.53■□□□□ 0.56
MATR3-235ENST00000506147 GOLGA8BA8MQT2 603 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 TRAF5O00463 557 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 PTPRAP18433 802 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 LDLRAD1Q5T700 205 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 GMCL1P1Q8NEA9 526 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
MATR3-235ENST00000506147 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 TMX2Q9Y320 296 aa18.52■□□□□ 0.56
MATR3-235ENST00000506147 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
MATR3-235ENST00000506147 VGLL4Q14135 290 aa18.51■□□□□ 0.55
MATR3-235ENST00000506147 TTLL12Q14166 644 aaPredicted RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 SHROOM1Q2M3G4 852 aaPredicted RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 NOL8Q76FK4 1167 aaKnown RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 C2orf69Q8N8R5 385 aa18.51■□□□□ 0.55
MATR3-235ENST00000506147 FANCBQ8NB91 859 aa18.51■□□□□ 0.55
MATR3-235ENST00000506147 GTF3C6Q969F1 213 aa18.51■□□□□ 0.55
MATR3-235ENST00000506147 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 RBM28Q9NW13 759 aaKnown RBP18.51■□□□□ 0.55
MATR3-235ENST00000506147 PAPPA2Q9BXP8 1791 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 RASSF10A6NK89 507 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 KIF5BP33176 963 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 PRKG1Q13976 671 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 CTCFLQ8NI51 663 aaPredicted RBP18.5■□□□□ 0.55
MATR3-235ENST00000506147 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
MATR3-235ENST00000506147 LLPHQ9BRT6 129 aaKnown RBP18.5■□□□□ 0.55
MATR3-235ENST00000506147 GBA2Q9HCG7 927 aaPredicted RBP18.5■□□□□ 0.55
MATR3-235ENST00000506147 DAXXQ9UER7 740 aaPredicted RBP18.5■□□□□ 0.55
MATR3-235ENST00000506147 SNCAIPQ9Y6H5 919 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 DOCK1Q14185 1865 aa18.5■□□□□ 0.55
MATR3-235ENST00000506147 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
MATR3-235ENST00000506147 LARGE1O95461 756 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 GNAQP50148 359 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 USP14P54578 494 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 PPATQ06203 517 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 SCRN1Q12765 414 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
MATR3-235ENST00000506147 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 ERO1BQ86YB8 467 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 DCAF4Q8WV16 495 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 NAP1L2Q9ULW6 460 aaPredicted RBP18.49■□□□□ 0.55
MATR3-235ENST00000506147 FZD1Q9UP38 647 aa18.49■□□□□ 0.55
MATR3-235ENST00000506147 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
MATR3-235ENST00000506147 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 PDHBP11177 359 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 SMARCA1P28370 1054 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 GRM4Q14833 912 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 RTN1Q16799 776 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 DEFB115Q30KQ5 88 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 ASPRV1Q53RT3 343 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
MATR3-235ENST00000506147 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 NUP133Q8WUM0 1156 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 LPAR1Q92633 364 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 GMCL1Q96IK5 515 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 LZTS2Q9BRK4 669 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 VCPKMTQ9H867 229 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 ZNF408Q9H9D4 720 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 THSD7BQ9C0I4 1608 aa18.48■□□□□ 0.55
MATR3-235ENST00000506147 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
MATR3-235ENST00000506147 PALM3A6NDB9 673 aaPredicted RBP18.47■□□□□ 0.55
MATR3-235ENST00000506147 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 F5H6K3 240 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 CDKL5O76039 1030 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 PARP1P09874 1014 aaKnown RBP18.47■□□□□ 0.55
MATR3-235ENST00000506147 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
MATR3-235ENST00000506147 KLRC3Q07444 240 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 STK3Q13188 491 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 CST9Q5W186 159 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 LRRC47Q8N1G4 583 aaKnown RBP18.47■□□□□ 0.55
MATR3-235ENST00000506147 ACER1Q8TDN7 264 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 FAM217BQ9NTX9 383 aaPredicted RBP18.47■□□□□ 0.55
MATR3-235ENST00000506147 AFG3L2Q9Y4W6 797 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
MATR3-235ENST00000506147 ATAD5Q96QE3 1844 aa18.46■□□□□ 0.55
MATR3-235ENST00000506147 UBE2Q2LH0YL09 131 aa18.46■□□□□ 0.55
MATR3-235ENST00000506147 CPLX1O14810 134 aa18.46■□□□□ 0.55
MATR3-235ENST00000506147 ECE1P42892 770 aa18.46■□□□□ 0.55
MATR3-235ENST00000506147 BACE1P56817 501 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms