RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 VWCEQ96DN2 955 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 FMNL2Q96PY5 1086 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 CNNM2Q9H8M5 875 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 SLAMF8Q9P0V8 285 aa5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P29-201ENST00000505659 DNAJC25-GNG10A0A024R161 153 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 ZNF165P49910 485 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 SNW1Q13573 536 aaKnown RBP5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 RALGPS1Q5JS13 557 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 CDCP2Q5VXM1 449 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 NLRC3Q7RTR2 1065 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 FLAD1Q8NFF5 587 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 ASPNQ9BXN1 380 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 GPR62Q9BZJ7 368 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 PPT2Q9UMR5 302 aa5.86□□□□□ -1.47
HMGB1P29-201ENST00000505659 TSPYL5Q86VY4 417 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 NT5DC4Q86YG4 428 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 FAM168AQ92567 244 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 ZNF428Q96B54 188 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 ASIC4Q96FT7 647 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 ALPK1Q96QP1 1244 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 SLC9A7Q96T83 725 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 DUSP13Q9UII6 198 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 KCNH3Q9ULD8 1083 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 ZNRF3Q9ULT6 936 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
HMGB1P29-201ENST00000505659 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 BIN1O00499 593 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 ACRP10323 421 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 NME1P15531 152 aaKnown RBP5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 ERVFC1P60507 584 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 EGR3Q06889 387 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 PAK2Q13177 524 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 NBPF12Q5TAG4 269 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 OGFOD2Q6N063 350 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 CCDC81Q6ZN84 652 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 TMPRSS7Q7RTY8 843 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 TMC3Q7Z5M5 1100 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 TMEM192Q8IY95 271 aa5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 TRIT1Q9H3H1 467 aaKnown RBP5.84□□□□□ -1.47
HMGB1P29-201ENST00000505659 LTKP29376 864 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 HK2P52789 917 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 CHMP4BP1P59074 171 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 FBXW10Q5XX13 1052 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 RUFY4Q6ZNE9 571 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 SLC6A18Q96N87 628 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 FERD3LQ96RJ6 166 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 MINPP1Q9UNW1 487 aa5.83□□□□□ -1.48
HMGB1P29-201ENST00000505659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 TNFRSF10CO14798 259 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 CLEC3AO75596 197 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 NMIQ13287 307 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZSWIM9Q86XI8 627 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZNF654Q8IZM8 581 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZNF503-AS2A6NEH8 195 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 TRHRP34981 398 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 GDNFP39905 211 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 RNF4P78317 190 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZYXQ15942 572 aaKnown RBP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 KCNMB1Q16558 191 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 CLEC16AQ2KHT3 1053 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 LRRFIP1Q32MZ4 808 aaKnown RBP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 LIN37Q96GY3 246 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 HDAC8Q9BY41 377 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 PRDM14Q9GZV8 571 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 EBF1Q9UH73 591 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 EFR3BQ9Y2G0 817 aa5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P29-201ENST00000505659 C9IYK1 514 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 PRAMEF1O95521 474 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 TXKP42681 527 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 TEKQ02763 1124 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 RAD51AP2Q09MP3 1159 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 TDRD10Q5VZ19 366 aaKnown RBP5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 LSRQ86X29 649 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 KIRREL1Q96J84 757 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 ACBD3Q9H3P7 528 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 FAM86C1Q9NVL1 165 aa5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
HMGB1P29-201ENST00000505659 MEIS1O00470 390 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZGLP1P0C6A0 271 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 CCNFP41002 786 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 AFMP43652 599 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZNF648Q5T619 568 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 PPFIBP1Q86W92 1011 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 GPRASP2Q96D09 838 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms