RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MLECQ14165 292 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 THAP5Q7Z6K1 395 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 DTWD2Q8NBA8 298 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 PIWIL2Q8TC59 973 aaKnown RBP6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 RNF141Q8WVD5 230 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CCDC74BQ96LY2 380 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 KREMEN1Q96MU8 473 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 GMIPQ9P107 970 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 NCAPD3P42695 1498 aa6.13□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SCAMP3O14828 347 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 UBOX5O94941 541 aa6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 RAG1P15918 1043 aa6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 RACK1P63244 317 aaKnown RBP6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SLITRK4Q8IW52 837 aa6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 KIAA1522Q9P206 1035 aaPredicted RBP6.12□□□□□ -1.43
PDLIM1P4-201ENST00000504327 PEG3Q9GZU2 1588 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 RGS13O14921 159 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 GBP1P32455 592 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ZNF165P49910 485 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 DUSP15Q9H1R2 295 aaPredicted RBP6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 LMCD1Q9NZU5 365 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 RNF114Q9Y508 228 aa6.11□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SMARCA2P51531 1590 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ESR1P03372 595 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 JUNBP17275 347 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 NCLP19338 710 aaKnown RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 NLRC3Q7RTR2 1065 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 METTL16Q86W50 562 aaKnown RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 REXO1Q8N1G1 1221 aaKnown RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 DRC1Q96MC2 740 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ASPNQ9BXN1 380 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 DDX41Q9UJV9 622 aaKnown RBP6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 KCNH3Q9ULD8 1083 aa6.1□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SHISA3A0PJX4 238 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 BIN1O00499 593 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SRFP11831 508 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CHMP4BP1P59074 171 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 HDLBPQ00341 1268 aaKnown RBP6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CDCP2Q5VXM1 449 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CREG2Q8IUH2 290 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 ASIC4Q96FT7 647 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 FMNL2Q96PY5 1086 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 GPR62Q9BZJ7 368 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 TRIT1Q9H3H1 467 aaKnown RBP6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 SLAMF8Q9P0V8 285 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 CTNND2Q9UQB3 1225 aa6.09□□□□□ -1.43
PDLIM1P4-201ENST00000504327 HMGXB3Q12766 1538 aa6.09□□□□□ -1.44
PDLIM1P4-201ENST00000504327 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 MEIS3P2A8K0S8 358 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 GAB4Q2WGN9 574 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 TMPRSS7Q7RTY8 843 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 FLAD1Q8NFF5 587 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 VWCEQ96DN2 955 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 ZNF512BQ96KM6 892 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 SPATA32Q96LK8 384 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 ALPK1Q96QP1 1244 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 GPATCH2Q9NW75 528 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 DUSP13Q9UII6 198 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 RSF1Q96T23 1441 aaPredicted RBP6.08□□□□□ -1.44
PDLIM1P4-201ENST00000504327 FAM86C2PA6NEL3 165 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 NME1P15531 152 aaKnown RBP6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 LTKP29376 864 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 RNF4P78317 190 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 PAK2Q13177 524 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 RALGPS1Q5JS13 557 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 TSPYL5Q86VY4 417 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 NT5DC4Q86YG4 428 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 SREK1Q8WXA9 508 aaKnown RBP6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 FAM168AQ92567 244 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 PPT2Q9UMR5 302 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 WIZO95785 1651 aa6.07□□□□□ -1.44
PDLIM1P4-201ENST00000504327 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 CLEC3AO75596 197 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 TCF3P15923 654 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 EGR3Q06889 387 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 SNW1Q13573 536 aaKnown RBP6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 LRRFIP1Q32MZ4 808 aaKnown RBP6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 ZNF654Q8IZM8 581 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 FERD3LQ96RJ6 166 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 PCDHA11Q9Y5I1 949 aa6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 BAZ1BQ9UIG0 1483 aaKnown RBP6.06□□□□□ -1.44
PDLIM1P4-201ENST00000504327 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
PDLIM1P4-201ENST00000504327 TNFRSF10CO14798 259 aa6.05□□□□□ -1.44
PDLIM1P4-201ENST00000504327 SMARCA5O60264 1052 aaPredicted RBP6.05□□□□□ -1.44
PDLIM1P4-201ENST00000504327 CLEC16AQ2KHT3 1053 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms