RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 INTS8Q75QN2 995 aaKnown RBP19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 VEZTQ9HBM0 779 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 USP6P35125 1406 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 TRAF5O00463 557 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 NEBLO76041 1014 aa19.15■□□□□ 0.66
HMGXB3-201ENST00000502717 COPB1P53618 953 aaKnown RBP19.14■□□□□ 0.66
HMGXB3-201ENST00000502717 SNCBQ16143 134 aa19.14■□□□□ 0.66
HMGXB3-201ENST00000502717 CEP83Q9Y592 693 aa19.14■□□□□ 0.66
HMGXB3-201ENST00000502717 ALDH3A1P30838 453 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 KRT71Q3SY84 523 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 MIGA1Q8NAN2 632 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 MTUS1Q9ULD2 1270 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 SOWAHDA6NJG2 315 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 RPS6KA1Q15418 735 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 GKAP1Q5VSY0 366 aaPredicted RBP19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 PLCB1Q9NQ66 1216 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 NKIRAS1Q9NYS0 192 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 CEP104O60308 925 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 EPHB4P54760 987 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 GRM1Q13255 1194 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 MADDQ8WXG6 1647 aa19.14■□□□□ 0.65
HMGXB3-201ENST00000502717 E2F4Q16254 413 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 DHX40Q8IX18 779 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 PRR36Q9H6K5 1346 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 BTBD18B2RXH4 712 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 TADA3O75528 432 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 PCK1P35558 622 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 CCZ1BP86790 482 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 CCZ1P86791 482 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 GRIPAP1Q4V328 841 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 ZMYM1Q5SVZ6 1142 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 FMR1NBQ8N0W7 255 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 PPFIBP2Q8ND30 876 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 TLR7Q9NYK1 1049 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 DBNLQ9UJU6 430 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 FGAP02671 866 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 ALDH8A1Q9H2A2 487 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 MAN1B1Q9UKM7 699 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 GBP1P32455 592 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 CTNNA1P35221 906 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 ZAP70P43403 619 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 GUCY2FP51841 1108 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 TAOK1Q7L7X3 1001 aa19.13■□□□□ 0.65
HMGXB3-201ENST00000502717 NEDD9Q14511 834 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 TNIP1Q15025 636 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 IQCB1Q15051 598 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 GTPBP6O43824 516 aaPredicted RBP19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 RPAINQ86UA6 219 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 ZNF594Q96JF6 807 aaPredicted RBP19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 STIM2Q9P246 746 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 TSPOAP1O95153 1857 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 PTPN21Q16825 1174 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 GOLPH3LQ9H4A5 285 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 ENC1O14682 589 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 ASIC2Q16515 512 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 CCDC25Q86WR0 208 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 SYCP3Q8IZU3 236 aa19.12■□□□□ 0.65
HMGXB3-201ENST00000502717 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 IGSF1Q8N6C5 1336 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 ZBTB22O15209 634 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 TPTE2Q6XPS3 522 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 ZBTB16Q05516 673 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 CUL5Q93034 780 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 BEGAINQ9BUH8 593 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 ST7Q9NRC1 585 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 LMTK2Q8IWU2 1503 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 CTNNA2P26232 953 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 SRLQ86TD4 932 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 ARMT1Q9H993 441 aa19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.11■□□□□ 0.65
HMGXB3-201ENST00000502717 ARMCX5Q6P1M9 558 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 PLEKHA4Q9H4M7 779 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 IKBKGQ9Y6K9 419 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 SFMBT2Q5VUG0 894 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 E4F1Q66K89 784 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 IQSEC3Q9UPP2 1182 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 SH3TC1Q8TE82 1336 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 CCDC65Q8IXS2 484 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 RIPOR2Q9Y4F9 1068 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 SAMM50Q9Y512 469 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 E9PCH4 1651 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 IQSEC2Q5JU85 1478 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 GCKP35557 465 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 RRP36Q96EU6 259 aaKnown RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 FAM207AQ9NSI2 230 aaPredicted RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 SAMSN1Q9NSI8 373 aaKnown RBP19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 VPS54Q9P1Q0 977 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 USP21Q9UK80 565 aa19.1■□□□□ 0.65
HMGXB3-201ENST00000502717 ATP2A1O14983 1001 aa19.09■□□□□ 0.65
HMGXB3-201ENST00000502717 HLA-DOAP06340 250 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms