RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
RNF4-202ENST00000502316 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
RNF4-202ENST00000502316 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 KIAA1755Q5JYT7 1200 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 RCSD1Q6JBY9 416 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 RALYLQ86SE5 291 aaKnown RBP16.71■□□□□ 0.27
RNF4-202ENST00000502316 IQCA1Q86XH1 822 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
RNF4-202ENST00000502316 RASEFQ8IZ41 740 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 STX8Q9UNK0 236 aa16.71■□□□□ 0.27
RNF4-202ENST00000502316 TRPA1O75762 1119 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.26
RNF4-202ENST00000502316 KRT32Q14532 448 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
RNF4-202ENST00000502316 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
RNF4-202ENST00000502316 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
RNF4-202ENST00000502316 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
RNF4-202ENST00000502316 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
RNF4-202ENST00000502316 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
RNF4-202ENST00000502316 ENAHQ8N8S7 591 aaPredicted RBP16.69■□□□□ 0.26
RNF4-202ENST00000502316 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
RNF4-202ENST00000502316 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
RNF4-202ENST00000502316 SNX14Q9Y5W7 946 aa16.69■□□□□ 0.26
RNF4-202ENST00000502316 TNKSO95271 1327 aa16.69■□□□□ 0.26
RNF4-202ENST00000502316 ADGRA2Q96PE1 1338 aa16.69■□□□□ 0.26
RNF4-202ENST00000502316 F5H6K3 240 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 WDR46O15213 610 aaKnown RBP16.68■□□□□ 0.26
RNF4-202ENST00000502316 SEC24BO95487 1268 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 NDUFB10O96000 172 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 TOP1P11387 765 aaKnown RBP16.68■□□□□ 0.26
RNF4-202ENST00000502316 ANTXR2P58335 489 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 KLRC3Q07444 240 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 CRHR2Q13324 411 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
RNF4-202ENST00000502316 SEC23AQ15436 765 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
RNF4-202ENST00000502316 PARK7Q99497 189 aaKnown RBP16.68■□□□□ 0.26
RNF4-202ENST00000502316 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 PNMA3Q9UL41 463 aa16.68■□□□□ 0.26
RNF4-202ENST00000502316 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 FOXN1O15353 648 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 CATSPERGQ6ZRH7 1159 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 SPICE1Q8N0Z3 855 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 GMCL1Q96IK5 515 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
RNF4-202ENST00000502316 RPAP3Q9H6T3 665 aaPredicted RBP16.67■□□□□ 0.26
RNF4-202ENST00000502316 ZFYVE28Q9HCC9 887 aa16.67■□□□□ 0.26
RNF4-202ENST00000502316 TLR2O60603 784 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 CYP2C8P10632 490 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 OSBPP22059 807 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 MCCP23508 829 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 MCM5P33992 734 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 IGDCC4Q8TDY8 1250 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 RLFQ13129 1914 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
RNF4-202ENST00000502316 PRC1O43663 620 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
RNF4-202ENST00000502316 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
RNF4-202ENST00000502316 SART3Q15020 963 aaKnown RBP16.65■□□□□ 0.26
RNF4-202ENST00000502316 SLFN13Q68D06 897 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 LBX2Q6XYB7 198 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 TMEM87BQ96K49 555 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 PARP14Q460N5 1801 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
RNF4-202ENST00000502316 ERICH2A1L162 156 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 HSPA8P11142 646 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 ANAPC15P60006 121 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 HERVK_113P62684 666 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 C17orf99Q6UX52 265 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 PNMA1Q8ND90 353 aa16.64■□□□□ 0.25
RNF4-202ENST00000502316 SMCR8Q8TEV9 937 aaPredicted RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 P2RX7Q99572 595 aaKnown RBP16.64■□□□□ 0.25
RNF4-202ENST00000502316 TANGO6Q9C0B7 1094 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms