RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
COL9A2-211ENST00000496215 ATP2B2Q01814 1243 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 MTFR1Q15390 333 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 GPRC5AQ8NFJ5 357 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 LPAR1Q92633 364 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 PAGR1Q9BTK6 254 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 TANGO6Q9C0B7 1094 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 PARP14Q460N5 1801 aa24.58■■□□□ 1.53
COL9A2-211ENST00000496215 PDE4DIPQ5VU43 2346 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 PRDM1O75626 825 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 EEF2P13639 858 aaKnown RBP24.57■■□□□ 1.52
COL9A2-211ENST00000496215 EN2P19622 333 aaPredicted RBP24.57■■□□□ 1.52
COL9A2-211ENST00000496215 GRK4P32298 578 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 PDE4BQ07343 736 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 VPS53Q5VIR6 699 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.57■■□□□ 1.52
COL9A2-211ENST00000496215 VCPKMTQ9H867 229 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 CCDC171Q6TFL3 1326 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 MYH4Q9Y623 1939 aa24.57■■□□□ 1.52
COL9A2-211ENST00000496215 PLIN4Q96Q06 1357 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 CNMDO75829 334 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 SDSP20132 328 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 PDE4AP27815 886 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 ERVK-9P63128 1117 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 ERVK-24P63145 666 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 Q3C1V9 767 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 DIAPH3Q9NSV4 1193 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 LAMA4Q16363 1823 aa24.56■■□□□ 1.52
COL9A2-211ENST00000496215 SLC34A2O95436 690 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 ELNP15502 786 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 MFAP1P55081 439 aaKnown RBP24.55■■□□□ 1.52
COL9A2-211ENST00000496215 ZNF589Q86UQ0 364 aaPredicted RBP24.55■■□□□ 1.52
COL9A2-211ENST00000496215 ZNF444Q8N0Y2 327 aaPredicted RBP24.55■■□□□ 1.52
COL9A2-211ENST00000496215 SPICE1Q8N0Z3 855 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 SLAIN1Q8ND83 568 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 GOPCQ9HD26 462 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 GJD2Q9UKL4 321 aa24.55■■□□□ 1.52
COL9A2-211ENST00000496215 SPDYE16A6NNV3 312 aaPredicted RBP24.54■■□□□ 1.52
COL9A2-211ENST00000496215 HIP1O00291 1037 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 WDR46O15213 610 aaKnown RBP24.54■■□□□ 1.52
COL9A2-211ENST00000496215 IRF5Q13568 498 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 LBX2Q6XYB7 198 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 PORCNQ9H237 461 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 RABGAP1Q9Y3P9 1069 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 ZMYM6O95789 1325 aa24.54■■□□□ 1.52
COL9A2-211ENST00000496215 ADCY3O60266 1144 aa24.53■■□□□ 1.52
COL9A2-211ENST00000496215 CCAR1Q8IX12 1150 aaKnown RBP24.53■■□□□ 1.52
COL9A2-211ENST00000496215 RAD21O60216 631 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 TSPY3P0CV98 308 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 TSPY8P0CW00 308 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 MAPK4P31152 587 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 ALX1Q15699 326 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 TTC22Q5TAA0 569 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 TMEM106CQ9BVX2 250 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 BTBD7Q9P203 1132 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 NYAP2Q9P242 653 aa24.52■■□□□ 1.52
COL9A2-211ENST00000496215 IGKV6D-41A0A0C4DH26 115 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 HSPD1P10809 573 aaKnown RBP24.51■■□□□ 1.51
COL9A2-211ENST00000496215 CCNA1P78396 465 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 CTDSPL2Q05D32 466 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 COG2Q14746 738 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 SHISA4Q96DD7 197 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 CWC22Q9HCG8 908 aaKnown RBP24.51■■□□□ 1.51
COL9A2-211ENST00000496215 BIN2Q9UBW5 565 aaPredicted RBP24.51■■□□□ 1.51
COL9A2-211ENST00000496215 ANAPC4Q9UJX5 808 aa24.51■■□□□ 1.51
COL9A2-211ENST00000496215 FLOT1O75955 427 aa24.5■■□□□ 1.51
COL9A2-211ENST00000496215 CCL5P13501 91 aa24.5■■□□□ 1.51
COL9A2-211ENST00000496215 GSPT1P15170 499 aaKnown RBP24.5■■□□□ 1.51
COL9A2-211ENST00000496215 CWC27Q6UX04 472 aaKnown RBP24.5■■□□□ 1.51
COL9A2-211ENST00000496215 PXYLP1Q8TE99 480 aa24.5■■□□□ 1.51
COL9A2-211ENST00000496215 SOCS4Q8WXH5 440 aa24.5■■□□□ 1.51
COL9A2-211ENST00000496215 CEP95Q96GE4 821 aa24.5■■□□□ 1.51
COL9A2-211ENST00000496215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.5■■□□□ 1.51
COL9A2-211ENST00000496215 INHAP05111 366 aa24.49■■□□□ 1.51
COL9A2-211ENST00000496215 UBXN2AP68543 259 aa24.49■■□□□ 1.51
COL9A2-211ENST00000496215 NEDD1Q8NHV4 660 aa24.49■■□□□ 1.51
COL9A2-211ENST00000496215 UNC93B1Q9H1C4 597 aa24.49■■□□□ 1.51
COL9A2-211ENST00000496215 HOXC10Q9NYD6 342 aa24.49■■□□□ 1.51
COL9A2-211ENST00000496215 FGAP02671 866 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 COL11A1P12107 1806 aaPredicted RBP24.48■■□□□ 1.51
COL9A2-211ENST00000496215 TFAP4Q01664 338 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 FAM47AQ5JRC9 791 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 GPR142Q7Z601 462 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 MTMR4Q9NYA4 1195 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 CLIP2Q9UDT6 1046 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 ZNF236Q9UL36 1845 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 TACC3Q9Y6A5 838 aa24.48■■□□□ 1.51
COL9A2-211ENST00000496215 TSPY2A6NKD2 308 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 TTLL1O95922 423 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 TRIM32Q13049 653 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 FAM83BQ5T0W9 1011 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 PLEKHH3Q7Z736 793 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 MB21D1Q8N884 522 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 USP6NLQ92738 828 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 SYNPO2Q9UMS6 1093 aa24.47■■□□□ 1.51
COL9A2-211ENST00000496215 DSG3P32926 999 aa24.46■■□□□ 1.51
COL9A2-211ENST00000496215 PPP4R3BQ5MIZ7 849 aa24.46■■□□□ 1.51
COL9A2-211ENST00000496215 WDR78Q5VTH9 848 aa24.46■■□□□ 1.51
COL9A2-211ENST00000496215 SAMD1Q6SPF0 538 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms