RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 USP17L19D6RCP7 530 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 USP17L20D6RJB6 530 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 FKTNO75072 461 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 TTLL1O95922 423 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 USP17L24Q0WX57 530 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 CATSPERGQ6ZRH7 1159 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 SPICE1Q8N0Z3 855 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
COL1A1-208ENST00000494334 LPAR1Q92633 364 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 ESR2Q92731 530 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 P2RX7Q99572 595 aaKnown RBP16.01■□□□□ 0.15
COL1A1-208ENST00000494334 TCP11L1Q9NUJ3 509 aa16.01■□□□□ 0.15
COL1A1-208ENST00000494334 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
COL1A1-208ENST00000494334 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 BCRP11274 1271 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 NOVP48745 357 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 NT5C2P49902 561 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
COL1A1-208ENST00000494334 SP3Q02447 781 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 COL13A1Q5TAT6 717 aaPredicted RBP16■□□□□ 0.15
COL1A1-208ENST00000494334 RPAP3Q9H6T3 665 aaPredicted RBP16■□□□□ 0.15
COL1A1-208ENST00000494334 GOPCQ9HD26 462 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
COL1A1-208ENST00000494334 B4E1Z4 1266 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 F5H6K3 240 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 KDM4AO75164 1064 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 KLRC3Q07444 240 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 NECTIN1Q15223 517 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 LRRC47Q8N1G4 583 aaKnown RBP15.99■□□□□ 0.15
COL1A1-208ENST00000494334 KRT23Q9C075 422 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 SYNPO2Q9UMS6 1093 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 STX8Q9UNK0 236 aa15.99■□□□□ 0.15
COL1A1-208ENST00000494334 E7EWF7 191 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 SLC27A2O14975 620 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 WDR46O15213 610 aaKnown RBP15.98■□□□□ 0.15
COL1A1-208ENST00000494334 RAD21O60216 631 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 HERVK_113P62684 666 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 STOX1Q6ZVD7 989 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 ZKSCAN3Q9BRR0 538 aa15.98■□□□□ 0.15
COL1A1-208ENST00000494334 NDUFB10O96000 172 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 GCLCP48506 637 aaPredicted RBP15.97■□□□□ 0.15
COL1A1-208ENST00000494334 CAP1Q01518 475 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 TRDNQ13061 729 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 CREB3L3Q68CJ9 461 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 RCSD1Q6JBY9 416 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 POTEEQ6S8J3 1075 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 ANKRD13CQ8N6S4 541 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 GMCL1P1Q8NEA9 526 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
COL1A1-208ENST00000494334 PEX10O60683 326 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 LACTBP83111 547 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-208ENST00000494334 COG2Q14746 738 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 FAM110CQ1W6H9 321 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 FAM83BQ5T0W9 1011 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 CYB5R4Q7L1T6 521 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 IQCA1Q86XH1 822 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 NCOA7Q8NI08 942 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 ERO1AQ96HE7 468 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 TTC14Q96N46 770 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
COL1A1-208ENST00000494334 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 TANGO6Q9C0B7 1094 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 RBPJLQ9UBG7 517 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 CASP8AP2Q9UKL3 1982 aa15.96■□□□□ 0.15
COL1A1-208ENST00000494334 LAMA4Q16363 1823 aa15.96■□□□□ 0.14
COL1A1-208ENST00000494334 SPDYE16A6NNV3 312 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-208ENST00000494334 FLOT1O75955 427 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 TOP1P11387 765 aaKnown RBP15.95■□□□□ 0.14
COL1A1-208ENST00000494334 CTGFP29279 349 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 DSG3P32926 999 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 CCDC178Q5BJE1 867 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 LBX2Q6XYB7 198 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 GTF3C2Q8WUA4 911 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-208ENST00000494334 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-208ENST00000494334 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 TXNRD2Q9NNW7 524 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 HOXC10Q9NYD6 342 aa15.95■□□□□ 0.14
COL1A1-208ENST00000494334 CNMDO75829 334 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
COL1A1-208ENST00000494334 MCCP23508 829 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 Q3C1V9 767 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 RNF20Q5VTR2 975 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
COL1A1-208ENST00000494334 RALYLQ86SE5 291 aaKnown RBP15.94■□□□□ 0.14
COL1A1-208ENST00000494334 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 MORF4L1Q9UBU8 362 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 GTF3C3Q9Y5Q9 886 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 TNKSO95271 1327 aa15.94■□□□□ 0.14
COL1A1-208ENST00000494334 REC8O95072 547 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 BMP3P12645 472 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 KIF22Q14807 665 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 OTOP1Q7RTM1 612 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 MB21D2Q8IYB1 491 aaPredicted RBP15.93■□□□□ 0.14
COL1A1-208ENST00000494334 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms