RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 VEGFBP49765 207 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 RUFY3Q7L099 469 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 PRRT2Q7Z6L0 340 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 CATIPQ7Z7H3 387 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 LRRC47Q8N1G4 583 aaKnown RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 ENAHQ8N8S7 591 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
VEGFA-214ENST00000493786 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 LPAR1Q92633 364 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 TBC1D32Q96NH3 1257 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 VCPKMTQ9H867 229 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 PDRG1Q9NUG6 133 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 TMX2Q9Y320 296 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 ATAD5Q96QE3 1844 aa8.91□□□□□ -0.98
VEGFA-214ENST00000493786 A0A1W2PRG0 241 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 SH2B2O14492 632 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 AOC2O75106 756 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 OSBPP22059 807 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 MAP2K2P36507 400 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 SLC1A4P43007 532 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 ANTXR2P58335 489 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 IRX3P78415 501 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 IKQ13123 557 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 ANKRD1Q15327 319 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 CCDC96Q2M329 555 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 SLFN13Q68D06 897 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 SPICE1Q8N0Z3 855 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 PNMA1Q8ND90 353 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 GMCL1P1Q8NEA9 526 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 MKL1Q969V6 931 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 TMEM47Q9BQJ4 181 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 BEGAINQ9BUH8 593 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 LRRC2Q9BYS8 371 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 UPF3BQ9BZI7 483 aaKnown RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 TANGO6Q9C0B7 1094 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 ZSWIM6Q9HCJ5 1215 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 PNMA3Q9UL41 463 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 NAP1L2Q9ULW6 460 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-214ENST00000493786 AGTPBP1Q9UPW5 1226 aa8.9□□□□□ -0.98
VEGFA-214ENST00000493786 F5H6K3 240 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 WDR46O15213 610 aaKnown RBP8.89□□□□□ -0.99
VEGFA-214ENST00000493786 ST18O60284 1047 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 CALM1P0DP23 149 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 CALM2P0DP24 149 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 CALM3P0DP25 149 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 CPA1P15085 419 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 VCAM1P19320 739 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 LIFRP42702 1097 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 NOVP48745 357 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 NEK4P51957 841 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 EXOSC10Q01780 885 aaKnown RBP8.89□□□□□ -0.99
VEGFA-214ENST00000493786 KLRC3Q07444 240 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 RABEP1Q15276 862 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 SEC23AQ15436 765 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 Q6ZUG5 572 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 ANKRD23Q86SG2 305 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 SIAH1Q8IUQ4 282 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 IL27Q8NEV9 243 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 IGDCC4Q8TDY8 1250 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 BRI3BPQ8WY22 251 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 ANKS1AQ92625 1134 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 BRF1Q92994 677 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 MS4A4AQ96JQ5 239 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 C12orf42Q96LP6 360 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 TCEANC2Q96MN5 208 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 LY9Q9HBG7 655 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 EMILIN3Q9NT22 766 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
VEGFA-214ENST00000493786 SLC12A7Q9Y666 1083 aa8.89□□□□□ -0.99
VEGFA-214ENST00000493786 GREB1LQ9C091 1923 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 BTBD19C9JJ37 291 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L11C9JVI0 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L18D6R9N7 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L22D6RA61 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L17D6RBQ6 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L19D6RCP7 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L20D6RJB6 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 PDHXO00330 501 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 DDAH1O94760 285 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 NDUFB10O96000 172 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 BMP3P12645 472 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 KIF5BP33176 963 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 MAP2K1Q02750 393 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 USP17L24Q0WX57 530 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 FAM83BQ5T0W9 1011 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 GPATCH4Q5T3I0 446 aaKnown RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 RCSD1Q6JBY9 416 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 SAMD1Q6SPF0 538 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-214ENST00000493786 IFNL1Q8IU54 200 aa8.88□□□□□ -0.99
VEGFA-214ENST00000493786 CTCFLQ8NI51 663 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms