RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CCDC8Q9H0W5 538 aaPredicted RBP21.49■■□□□ 1.03
NUP50-218ENST00000493456 SLC5A4Q9NY91 659 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 A0A0G2JMZ2 1700 aa21.49■■□□□ 1.03
NUP50-218ENST00000493456 PLCD1P51178 756 aa21.48■■□□□ 1.03
NUP50-218ENST00000493456 COG2Q14746 738 aa21.48■■□□□ 1.03
NUP50-218ENST00000493456 MB21D1Q8N884 522 aa21.48■■□□□ 1.03
NUP50-218ENST00000493456 SPATC1LQ9H0A9 340 aa21.48■■□□□ 1.03
NUP50-218ENST00000493456 POLR3DP05423 398 aaPredicted RBP21.47■■□□□ 1.03
NUP50-218ENST00000493456 GABPAQ06546 454 aa21.47■■□□□ 1.03
NUP50-218ENST00000493456 SEPT2Q15019 361 aa21.47■■□□□ 1.03
NUP50-218ENST00000493456 SHHQ15465 462 aa21.47■■□□□ 1.03
NUP50-218ENST00000493456 ZKSCAN2Q63HK3 967 aa21.47■■□□□ 1.03
NUP50-218ENST00000493456 EAF2Q96CJ1 260 aaPredicted RBP21.47■■□□□ 1.03
NUP50-218ENST00000493456 CDX2Q99626 313 aaPredicted RBP21.47■■□□□ 1.03
NUP50-218ENST00000493456 RIOK1Q9BRS2 568 aaKnown RBP21.47■■□□□ 1.03
NUP50-218ENST00000493456 PRDM5Q9NQX1 630 aaPredicted RBP21.47■■□□□ 1.03
NUP50-218ENST00000493456 NAV1Q8NEY1 1877 aa21.47■■□□□ 1.03
NUP50-218ENST00000493456 ERCC3P19447 782 aa21.46■■□□□ 1.03
NUP50-218ENST00000493456 SMAD3P84022 425 aaKnown RBP21.46■■□□□ 1.03
NUP50-218ENST00000493456 C1orf53Q5VUE5 145 aa21.46■■□□□ 1.03
NUP50-218ENST00000493456 ABRAQ8N0Z2 381 aa21.46■■□□□ 1.03
NUP50-218ENST00000493456 TANGO6Q9C0B7 1094 aa21.46■■□□□ 1.03
NUP50-218ENST00000493456 MUC3AQ02505 3323 aa21.46■■□□□ 1.03
NUP50-218ENST00000493456 TRIM60Q495X7 471 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 C9orf50Q5SZB4 431 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 MAFAQ8NHW3 353 aaPredicted RBP21.45■■□□□ 1.02
NUP50-218ENST00000493456 BADQ92934 168 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 SEMA6BQ9H3T3 888 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 MROH8Q9H579 483 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 ANTXR1Q9H6X2 564 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 PDLIM7Q9NR12 457 aa21.45■■□□□ 1.02
NUP50-218ENST00000493456 MAGEB6P1A0A0J9YX57 407 aa21.44■■□□□ 1.02
NUP50-218ENST00000493456 A0A1W2PRG0 241 aa21.44■■□□□ 1.02
NUP50-218ENST00000493456 MPHOSPH10O00566 681 aaKnown RBP21.44■■□□□ 1.02
NUP50-218ENST00000493456 COBLO75128 1261 aa21.44■■□□□ 1.02
NUP50-218ENST00000493456 ANO1Q5XXA6 986 aa21.44■■□□□ 1.02
NUP50-218ENST00000493456 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
NUP50-218ENST00000493456 C1orf115Q9H7X2 142 aa21.44■■□□□ 1.02
NUP50-218ENST00000493456 LRRC41Q15345 812 aa21.43■■□□□ 1.02
NUP50-218ENST00000493456 TTF1Q15361 905 aaPredicted RBP21.43■■□□□ 1.02
NUP50-218ENST00000493456 TMEM179Q6ZVK1 233 aa21.43■■□□□ 1.02
NUP50-218ENST00000493456 NRBP1Q9UHY1 535 aa21.43■■□□□ 1.02
NUP50-218ENST00000493456 MYCNP04198 464 aaPredicted RBP21.42■■□□□ 1.02
NUP50-218ENST00000493456 ADCYAP1R1P41586 468 aa21.42■■□□□ 1.02
NUP50-218ENST00000493456 MAML3Q96JK9 1138 aa21.42■■□□□ 1.02
NUP50-218ENST00000493456 MCM9Q9NXL9 1143 aa21.42■■□□□ 1.02
NUP50-218ENST00000493456 TMEM265A0A087WTH1 108 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 DSG3P32926 999 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 PLS1Q14651 629 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 FAM47AQ5JRC9 791 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 NCAPG2Q86XI2 1143 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 ERC1Q8IUD2 1116 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
NUP50-218ENST00000493456 SH2D4AQ9H788 454 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 SWAP70Q9UH65 585 aa21.41■■□□□ 1.02
NUP50-218ENST00000493456 TRIM43BA6NCK2 446 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 FLOT1O75955 427 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 FCER1AP12319 257 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 AACSQ86V21 672 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 TRIM43Q96BQ3 446 aaPredicted RBP21.4■■□□□ 1.02
NUP50-218ENST00000493456 TTYH1Q9H313 450 aaPredicted RBP21.4■■□□□ 1.02
NUP50-218ENST00000493456 ARHGEF10LQ9HCE6 1279 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 PHF24Q9UPV7 400 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 TACC3Q9Y6A5 838 aa21.4■■□□□ 1.02
NUP50-218ENST00000493456 ROBO3Q96MS0 1386 aa21.39■■□□□ 1.02
NUP50-218ENST00000493456 SLC25A27O95847 323 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 PDE6AP16499 860 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 PRAMEF19Q5SWL8 479 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 SH3RF1Q7Z6J0 888 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 MYLIPQ8WY64 445 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 FERMT2Q96AC1 680 aa21.39■■□□□ 1.01
NUP50-218ENST00000493456 DCP1AQ9NPI6 582 aaPredicted RBP21.39■■□□□ 1.01
NUP50-218ENST00000493456 WDR46O15213 610 aaKnown RBP21.38■■□□□ 1.01
NUP50-218ENST00000493456 CLTBP09497 229 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 RARBP10826 455 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 FOSL2P15408 326 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 TLE2Q04725 743 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 ICA1Q05084 483 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 KIAA1755Q5JYT7 1200 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 RNF180Q86T96 592 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 ATG4CQ96DT6 458 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 VCPKMTQ9H867 229 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 XPNPEP3Q9NQH7 507 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
NUP50-218ENST00000493456 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
NUP50-218ENST00000493456 RNPC3Q96LT9 517 aaKnown RBP21.37■■□□□ 1.01
NUP50-218ENST00000493456 ZNF532Q9HCE3 1301 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 EVX2Q03828 476 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 TMEM132BQ14DG7 1078 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 CEP85Q6P2H3 762 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 SPICE1Q8N0Z3 855 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 SLC44A5Q8NCS7 719 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 SDR42E1Q8WUS8 393 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 SYMPKQ92797 1274 aaKnown RBP21.36■■□□□ 1.01
NUP50-218ENST00000493456 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
NUP50-218ENST00000493456 DIS3Q9Y2L1 958 aaKnown RBP21.36■■□□□ 1.01
NUP50-218ENST00000493456 PARP14Q460N5 1801 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 KIAA0355O15063 1070 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms