RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 GH2P01242 217 aa16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 PHKBQ93100 1093 aa16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
PDZRN3-210ENST00000492909 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 RRP1BQ14684 758 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 SEPT2Q15019 361 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 TRIM22Q8IYM9 498 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 DCPSQ96C86 337 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 ATP2B2Q01814 1243 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 ICA1Q05084 483 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 GRM4Q14833 912 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 DCAF15Q66K64 600 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 TNPO1Q92973 898 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
PDZRN3-210ENST00000492909 FSD2A1L4K1 749 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 ZSCAN22P10073 491 aaPredicted RBP16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 CAP2P40123 477 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 GNAQP50148 359 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 JAG1P78504 1218 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 FMR1Q06787 632 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 CMTR1Q8N1G2 835 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 LRRC47Q8N1G4 583 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 CCDC82Q8N4S0 544 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 MTMR7Q9Y216 660 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
PDZRN3-210ENST00000492909 PLEKHA8P1O95397 391 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 SULF1Q8IWU6 871 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 MKL1Q969V6 931 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 GLIS2Q9BZE0 524 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 MAD2L2Q9UI95 211 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 ZBTB21Q9ULJ3 1066 aa16.34■□□□□ 0.21
PDZRN3-210ENST00000492909 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 ADM5C9JUS6 153 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 H3BQV1 296 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 PTMSP20962 102 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 FUT2Q10981 343 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 IFFO2Q5TF58 517 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 PRAMEF18Q5VWM3 479 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 ZC3H15Q8WU90 426 aaKnown RBP16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 WASF1Q92558 559 aa16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.21
PDZRN3-210ENST00000492909 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 TRAF5O00463 557 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 DEXIO95424 95 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 ASNSP08243 561 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 PDHBP11177 359 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 USP48Q86UV5 1035 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 SIAH1Q8IUQ4 282 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
PDZRN3-210ENST00000492909 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 F13A1P00488 732 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 USP17L2Q6R6M4 530 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 GINM1Q9NU53 330 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
PDZRN3-210ENST00000492909 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 KLRF2D3W0D1 207 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 CTNND1O60716 968 aaKnown RBP16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 ITGBL1O95965 494 aaPredicted RBP16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 FOSBP53539 338 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 ASPRV1Q53RT3 343 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 RBM27Q9P2N5 1060 aaKnown RBP16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
PDZRN3-210ENST00000492909 RASGRP2Q7LDG7 609 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms