RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MRPS27Q92552 414 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 CCDC17Q96LX7 622 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 RBSNQ9H1K0 784 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 TAOK3Q9H2K8 898 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 TNMDQ9H2S6 317 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
SMARCC1-208ENST00000492896 ATRNL1Q5VV63 1379 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 DICER1Q9UPY3 1922 aaKnown RBP10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 PPP6R2O75170 966 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 NR1I2O75469 434 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 PARP1P09874 1014 aaKnown RBP10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 TCP10Q12799 353 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 SLC39A14Q15043 492 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 RILPL1Q5EBL4 403 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 ADALQ6DHV7 355 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 ZSCAN29Q8IWY8 852 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 GMLQ99445 158 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 TDRD3Q9H7E2 651 aaKnown RBP10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 PI4KBQ9UBF8 816 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 CD2APQ9Y5K6 639 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 ATAD5Q96QE3 1844 aa10.53□□□□□ -0.72
SMARCC1-208ENST00000492896 DDTLA6NHG4 134 aaPredicted RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 CTAGE5O15320 804 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 KINO60870 393 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 TTLL1O95922 423 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 CALML3P27482 149 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 NLRP5P59047 1200 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM160A1Q05DH4 1040 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 NR5A1Q13285 461 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 PTPAQ15257 358 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 DLGAP5Q15398 846 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 ASPRV1Q53RT3 343 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 RBM43Q6ZSC3 357 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM177A1Q8N128 213 aaPredicted RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 OGFOD1Q8N543 542 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC148Q8NFR7 591 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 ANP32BQ92688 251 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 SGIP1Q9BQI5 828 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 GOLPH3LQ9H4A5 285 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 PPP1R1BQ9UD71 204 aaPredicted RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 NOL7Q9UMY1 257 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 CEP131Q9UPN4 1083 aa10.52□□□□□ -0.73
SMARCC1-208ENST00000492896 KLRF2D3W0D1 207 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 MPHOSPH10O00566 681 aaKnown RBP10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC192P0DO97 292 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 PDHBP11177 359 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 SMARCA1P28370 1054 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 CIAPIN1Q6FI81 312 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 SH3BP5LQ7L8J4 393 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 RASGRP2Q7LDG7 609 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 PRMT6Q96LA8 375 aaPredicted RBP10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 LTBP3Q9NS15 1303 aa10.51□□□□□ -0.73
SMARCC1-208ENST00000492896 NFKBIEO00221 500 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CYTH3O43739 400 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CUTAO60888 179 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 BMP15O95972 392 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 GOLGA8HP0CJ92 632 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CMA1P23946 247 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 MARCKSP29966 332 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 TOB1P50616 345 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 EIF6P56537 245 aaKnown RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 NPY5RQ15761 445 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CAMK4Q16566 473 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 SPDYE2Q495Y8 402 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 AXDND1Q5T1B0 1012 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 USP17L2Q6R6M4 530 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 METTL16Q86W50 562 aaKnown RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CLEC10AQ8IUN9 316 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 MTMR14Q8NCE2 650 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 RNF214Q8ND24 703 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 ENGASEQ8NFI3 743 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 JDP2Q8WYK2 163 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 UPF1Q92900 1129 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 GPKOWQ92917 476 aaPredicted RBP eCLIP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 TNFRSF25Q93038 417 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms