RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RASGRP2Q7LDG7 609 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 FAM151AQ8WW52 585 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 PHF20Q9BVI0 1012 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
SF3B1-211ENST00000487698 hCG_1642624A0A1W2PR95 340 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 SHTN1A0MZ66 631 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 TCP10L2B9ZVM9 353 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 WNT10BO00744 389 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 TTLL1O95922 423 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 SNHG28P0DPA3 235 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 NASPP49321 788 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 PFKFB3Q16875 520 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 PGBD1Q96JS3 809 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 CSRNP1Q96S65 589 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 LZTS2Q9BRK4 669 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 SPZ1Q9BXG8 430 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 FHDC1Q9C0D6 1143 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 FOXP1Q9H334 677 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 KCNJ14Q9UNX9 436 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 ATAD5Q96QE3 1844 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 FSD2A1L4K1 749 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 CYTH3O43739 400 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 SCG2P13521 617 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 ZNF445P59923 1031 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 NPY5RQ15761 445 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 CERKLQ49MI3 558 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 FAM83AQ86UY5 434 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 DIS3L2Q8IYB7 885 aaKnown RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 DPF2Q92785 391 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 VPS54Q9P1Q0 977 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 PGAP2Q9UHJ9 254 aa10.91□□□□□ -0.66
SF3B1-211ENST00000487698 HERC5Q9UII4 1024 aaKnown RBP10.91□□□□□ -0.66
SF3B1-211ENST00000487698 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 YEATS4O95619 227 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 PARP1P09874 1014 aaKnown RBP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 PDHBP11177 359 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 XBP1P17861 261 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 SMARCA1P28370 1054 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 GMPSP49915 693 aaPredicted RBP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 SAFBQ15424 915 aaKnown RBP eCLIP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 NBPF9Q3BBW0 867 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
SF3B1-211ENST00000487698 LINC00301Q8NCQ3 95 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
SF3B1-211ENST00000487698 USP17L5A8MUK1 530 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 KLRF2D3W0D1 207 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 MYO1BO43795 1136 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 GOLGA8HP0CJ92 632 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.67
SF3B1-211ENST00000487698 SHROOM1Q2M3G4 852 aaPredicted RBP10.9□□□□□ -0.67
SF3B1-211ENST00000487698 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 OXER1Q8TDS5 423 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.67
SF3B1-211ENST00000487698 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 CLIC4Q9Y696 253 aa10.9□□□□□ -0.67
SF3B1-211ENST00000487698 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
SF3B1-211ENST00000487698 EGFRP00533 1210 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 VEGFAP15692 232 aaPredicted RBP10.89□□□□□ -0.67
SF3B1-211ENST00000487698 GNL2Q13823 731 aaKnown RBP10.89□□□□□ -0.67
SF3B1-211ENST00000487698 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
SF3B1-211ENST00000487698 ASPRV1Q53RT3 343 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 ANO1Q5XXA6 986 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 TNFRSF25Q93038 417 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 MKL1Q969V6 931 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 KANSL2Q9H9L4 492 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 SH3GLB2Q9NR46 395 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 NYAP2Q9P242 653 aa10.89□□□□□ -0.67
SF3B1-211ENST00000487698 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
SF3B1-211ENST00000487698 JAG1P78504 1218 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 NR5A1Q13285 461 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 GAS2L3Q86XJ1 694 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 SIAH1Q8IUQ4 282 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 CDAN1Q8IWY9 1227 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 FAM177A1Q8N128 213 aaPredicted RBP10.88□□□□□ -0.67
SF3B1-211ENST00000487698 TMEM39BQ9GZU3 492 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 TBC1D12O60347 775 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 LIG1P18858 919 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 LMNB1P20700 586 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 KRT2P35908 639 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 TOB1P50616 345 aaPredicted RBP10.88□□□□□ -0.67
SF3B1-211ENST00000487698 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 ZNF543Q08ER8 600 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 SEPT2Q15019 361 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 PTPAQ15257 358 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 CCDC183Q5T5S1 534 aa10.88□□□□□ -0.67
SF3B1-211ENST00000487698 KCNG4Q8TDN1 519 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms