RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ICA1Q05084 483 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 GABPAQ06546 454 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 NOL8Q76FK4 1167 aaKnown RBP8.13□□□□□ -1.11
UBR4-214ENST00000486515 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CHST3Q7LGC8 479 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 SLC44A5Q8NCS7 719 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 NEDD1Q8NHV4 660 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 SYMPKQ92797 1274 aaKnown RBP8.13□□□□□ -1.11
UBR4-214ENST00000486515 BRF1Q92994 677 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 CLIP2Q9UDT6 1046 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 LIMCH1Q9UPQ0 1083 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBR4-214ENST00000486515 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 TRPM7Q96QT4 1865 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 ECM29Q5VYK3 1845 aa8.13□□□□□ -1.11
UBR4-214ENST00000486515 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 USP17L5A8MUK1 530 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 TBC1D8O95759 1140 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 AKR1B1P15121 316 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 SHMT1P34896 483 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 LIFRP42702 1097 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 ZNF157P51786 506 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 USP14P54578 494 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 AK2P54819 239 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 AKAP17AQ02040 695 aaKnown RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 IKQ13123 557 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 PPP2R5BQ15173 497 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 STOX1Q6ZVD7 989 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 METTL16Q86W50 562 aaKnown RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 MB21D2Q8IYB1 491 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 SCYL3Q8IZE3 742 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 DPF3Q92784 378 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 TMEM106CQ9BVX2 250 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 LRRC2Q9BYS8 371 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 ALDH8A1Q9H2A2 487 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 GBA2Q9HCG7 927 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 INCENPQ9NQS7 918 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 KIF3AQ9Y496 699 aa8.12□□□□□ -1.11
UBR4-214ENST00000486515 CTDP1Q9Y5B0 961 aaPredicted RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 KIAA0100Q14667 2235 aaKnown RBP8.12□□□□□ -1.11
UBR4-214ENST00000486515 KLF18A0A0U1RQI7 1052 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 USP17L10C9JJH3 530 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 GPR25O00155 361 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 SH2B2O14492 632 aaPredicted RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 ZBTB43O43298 467 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 CDKL5O76039 1030 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 TOP1P11387 765 aaKnown RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 CPA1P15085 419 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 GNAQP50148 359 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 METAP2P50579 478 aaKnown RBP eCLIP8.11□□□□□ -1.112e-13■□□□□ 8.6
UBR4-214ENST00000486515 EXOSC10Q01780 885 aaKnown RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 MAP3K10Q02779 954 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 SEPT2Q15019 361 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 CYB5R4Q7L1T6 521 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 IL17RAQ96F46 866 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 CEP95Q96GE4 821 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 TCEANC2Q96MN5 208 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 TSHZ2Q9NRE2 1034 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 MTMR4Q9NYA4 1195 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 NYAP2Q9P242 653 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 ZBTB21Q9ULJ3 1066 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 SYNPO2Q9UMS6 1093 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 LAMB1P07942 1786 aa8.11□□□□□ -1.11
UBR4-214ENST00000486515 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
UBR4-214ENST00000486515 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 FOCADQ5VW36 1801 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 USP2O75604 605 aaPredicted RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 DDAH1O94760 285 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 APOBRQ0VD83 1088 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 STK3Q13188 491 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 REM2Q8IYK8 340 aaPredicted RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 TRIM22Q8IYM9 498 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 ENAHQ8N8S7 591 aaPredicted RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 IGDCC4Q8TDY8 1250 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 ZKSCAN4Q969J2 545 aaPredicted RBP8.1□□□□□ -1.11
UBR4-214ENST00000486515 SNX21Q969T3 373 aa8.1□□□□□ -1.11
UBR4-214ENST00000486515 ZNF274Q96GC6 653 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms