RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 CYP2C8P10632 490 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 NOVP48745 357 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-219ENST00000479941 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 CCDC178Q5BJE1 867 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-219ENST00000479941 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-219ENST00000479941 IL17RBQ9NRM6 502 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
ATG4B-219ENST00000479941 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
ATG4B-219ENST00000479941 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
ATG4B-219ENST00000479941 FKTNO75072 461 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 KDM4AO75164 1064 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 REC8O95072 547 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 RNF20Q5VTR2 975 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 IQCA1Q86XH1 822 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 GTF3C2Q8WUA4 911 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-219ENST00000479941 ZNF296Q8WUU4 475 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-219ENST00000479941 TTC14Q96N46 770 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-219ENST00000479941 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.37
ATG4B-219ENST00000479941 B4E1Z4 1266 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 E7EWF7 191 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 F5H6K3 240 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 SLC27A2O14975 620 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 NMT2O60551 498 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-219ENST00000479941 SP3Q02447 781 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 KLRC3Q07444 240 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 KIAA1755Q5JYT7 1200 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 CREB3L3Q68CJ9 461 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
ATG4B-219ENST00000479941 DGKHQ86XP1 1220 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 P2RX7Q99572 595 aaKnown RBP12.76□□□□□ -0.37
ATG4B-219ENST00000479941 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
ATG4B-219ENST00000479941 RAD21O60216 631 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
ATG4B-219ENST00000479941 BCRP11274 1271 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 HERVK_113P62684 666 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 COG2Q14746 738 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
ATG4B-219ENST00000479941 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 ZSCAN10Q96SZ4 725 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-219ENST00000479941 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
ATG4B-219ENST00000479941 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 NDUFB10O96000 172 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
ATG4B-219ENST00000479941 ZKSCAN1P17029 563 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-219ENST00000479941 KIF22Q14807 665 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 ANKS1AQ92625 1134 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 ERO1AQ96HE7 468 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 TMEM47Q9BQJ4 181 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 UBAC1Q9BSL1 405 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
ATG4B-219ENST00000479941 TNKSO95271 1327 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 FLOT1O75955 427 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-219ENST00000479941 KRT32Q14532 448 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
ATG4B-219ENST00000479941 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 GMCL1Q96IK5 515 aa12.73□□□□□ -0.37
ATG4B-219ENST00000479941 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 ERICH2A1L162 156 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-219ENST00000479941 BMP3P12645 472 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 DSG3P32926 999 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 HSPA4P34932 840 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 SLC1A4P43007 532 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 MB21D2Q8IYB1 491 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-219ENST00000479941 MB21D1Q8N884 522 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-219ENST00000479941 GPRC5AQ8NFJ5 357 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 MTA3Q9BTC8 594 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms