RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
VPS52-217ENST00000478934 FEZ1Q99689 392 aa12.32□□□□□ -0.44
VPS52-217ENST00000478934 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
VPS52-217ENST00000478934 MAPK8IP1Q9UQF2 711 aa12.32□□□□□ -0.44
VPS52-217ENST00000478934 NLRP5P59047 1200 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 MTRQ99707 1265 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 CEP131Q9UPN4 1083 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 XBP1P17861 261 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 TFAP4Q01664 338 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 ENOX1Q8TC92 643 aaKnown RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
VPS52-217ENST00000478934 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 HOOK1Q9UJC3 728 aaKnown RBP12.31□□□□□ -0.44
VPS52-217ENST00000478934 ZPR1O75312 459 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 RCAN1P53805 252 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 KARSQ15046 597 aaKnown RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 CREBRFQ8IUR6 639 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 WDR24Q96S15 920 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 PLIN2Q99541 437 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.3□□□□□ -0.445e-7■■■■□ 20.9
VPS52-217ENST00000478934 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 NRDCO43847 1150 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 PLCD1P51178 756 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 CCDC93Q567U6 631 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 APTXQ7Z2E3 356 aaKnown RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
VPS52-217ENST00000478934 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 L2HGDHQ9H9P8 463 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 PPP2R2CQ9Y2T4 447 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 XDHP47989 1333 aa12.3□□□□□ -0.44
VPS52-217ENST00000478934 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 SCG2P13521 617 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 CUL4BQ13620 913 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 NR1I3Q14994 352 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 DZIP1Q86YF9 867 aaKnown RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 SOWAHDA6NJG2 315 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 SEC31AO94979 1220 aaKnown RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 CLCN6P51797 869 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 ZSWIM4Q9H7M6 989 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 AHDC1Q5TGY3 1603 aaPredicted RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
VPS52-217ENST00000478934 NRAPQ86VF7 1730 aa12.29□□□□□ -0.44
VPS52-217ENST00000478934 ORC4O43929 436 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 DDAH1O94760 285 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 CCT6AP40227 531 aaKnown RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 ELOA2Q8IYF1 753 aaPredicted RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 TGFBRAP1Q8WUH2 860 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 MYH8P13535 1937 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 RREB1Q92766 1687 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 USP5P45974 858 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 GNG11P61952 73 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 ATP2C1P98194 919 aaPredicted RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 RBL2Q08999 1139 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 E2F4Q16254 413 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 MAPKAPK5Q8IW41 473 aa12.28□□□□□ -0.44
VPS52-217ENST00000478934 MRPL44Q9H9J2 332 aaKnown RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
VPS52-217ENST00000478934 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.44
VPS52-217ENST00000478934 KIF2AO00139 706 aaPredicted RBP12.27□□□□□ -0.44
VPS52-217ENST00000478934 PPP2R5BQ15173 497 aa12.27□□□□□ -0.44
VPS52-217ENST00000478934 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.44
VPS52-217ENST00000478934 EEF2KMTQ96G04 330 aa12.27□□□□□ -0.44
VPS52-217ENST00000478934 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.44
VPS52-217ENST00000478934 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.44
VPS52-217ENST00000478934 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.44
VPS52-217ENST00000478934 A0A1B0GTH6 734 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 CYTH3O43739 400 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 TFRCP02786 760 aaKnown RBP12.27□□□□□ -0.45
VPS52-217ENST00000478934 CALM1P0DP23 149 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 CALM2P0DP24 149 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms