RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
HDAC6-222ENST00000478095 CPA4Q9UI42 421 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
HDAC6-222ENST00000478095 NEDD4P46934 1319 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 TSPY2A6NKD2 308 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 RAD21O60216 631 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 NMT2O60551 498 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 TLR2O60603 784 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 VCAM1P19320 739 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 USP14P54578 494 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 KIAA1755Q5JYT7 1200 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 SPICE1Q8N0Z3 855 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 NEDD1Q8NHV4 660 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-222ENST00000478095 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-222ENST00000478095 CTNNA3Q9UI47 895 aa12.17□□□□□ -0.46
HDAC6-222ENST00000478095 IGKV6D-41A0A0C4DH26 115 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 ORC4O43929 436 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-222ENST00000478095 IMMTQ16891 758 aaKnown RBP12.16□□□□□ -0.46
HDAC6-222ENST00000478095 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 CEP95Q96GE4 821 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 C12orf42Q96LP6 360 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-222ENST00000478095 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
HDAC6-222ENST00000478095 LAMB1P07942 1786 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 ADGRA2Q96PE1 1338 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 FKTNO75072 461 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 CYP21A2P08686 494 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 FGRP09769 529 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 OSBPP22059 807 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 CD99L2Q8TCZ2 262 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
HDAC6-222ENST00000478095 TAF6LQ9Y6J9 622 aa12.15□□□□□ -0.46
HDAC6-222ENST00000478095 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 B4E1Z4 1266 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 PEX10O60683 326 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 TTLL1O95922 423 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-222ENST00000478095 SP3Q02447 781 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 C17orf99Q6UX52 265 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
HDAC6-222ENST00000478095 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 NYAP2Q9P242 653 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 KDM4AO75164 1064 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
HDAC6-222ENST00000478095 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-222ENST00000478095 HERVK_113P62684 666 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 CAP1Q01518 475 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
HDAC6-222ENST00000478095 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 CATSPERGQ6ZRH7 1159 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 ANKRD13CQ8N6S4 541 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 LPAR1Q92633 364 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 ESR2Q92731 530 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 NUP88Q99567 741 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-222ENST00000478095 ZKSCAN3Q9BRR0 538 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
HDAC6-222ENST00000478095 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 NDUFB10O96000 172 aa12.12□□□□□ -0.47
HDAC6-222ENST00000478095 BCRP11274 1271 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms