RNA–Protein interactions for RNA: ENST00000477127.5

CCNL1-219, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-219ENST00000477127 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
CCNL1-219ENST00000477127 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
CCNL1-219ENST00000477127 GDF11O95390 407 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 USP5P45974 858 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 JAG1P78504 1218 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 TRIB2Q92519 343 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 EHD4Q9H223 541 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
CCNL1-219ENST00000477127 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
CCNL1-219ENST00000477127 CYP2B6P20813 491 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 BMP8BP34820 402 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 ERVK-24P63145 666 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
CCNL1-219ENST00000477127 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
CCNL1-219ENST00000477127 SERPINB13Q9UIV8 391 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
CCNL1-219ENST00000477127 RGS2P41220 211 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 USP14P54578 494 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
CCNL1-219ENST00000477127 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
CCNL1-219ENST00000477127 MAP4K1Q92918 833 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 C11orf49Q9H6J7 331 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 EMILIN3Q9NT22 766 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
CCNL1-219ENST00000477127 SIPA1L1O43166 1804 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 GH2P01242 217 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 PRKAR2AP13861 404 aaKnown RBP16.21■□□□□ 0.19
CCNL1-219ENST00000477127 ZKSCAN1P17029 563 aaPredicted RBP16.21■□□□□ 0.19
CCNL1-219ENST00000477127 CCNA1P78396 465 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 TRIM32Q13049 653 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 NECTIN1Q15223 517 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 GPR142Q7Z601 462 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 USP6NLQ92738 828 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 TTC14Q96N46 770 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 HAUS7Q99871 368 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 CABP5Q9NP86 173 aa16.21■□□□□ 0.19
CCNL1-219ENST00000477127 FOCADQ5VW36 1801 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 NMIQ13287 307 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-219ENST00000477127 TTF1Q15361 905 aaPredicted RBP16.2■□□□□ 0.18
CCNL1-219ENST00000477127 Q3C1V9 767 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 MORN1Q5T089 497 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 RNF20Q5VTR2 975 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 FEZ1Q99689 392 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 GDF15Q99988 308 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 DOCK3Q8IZD9 2030 aa16.2■□□□□ 0.18
CCNL1-219ENST00000477127 PSMA5P28066 241 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 PTH1RQ03431 593 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 CERKLQ49MI3 558 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-219ENST00000477127 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCNL1-219ENST00000477127 ZSCAN31Q96LW9 406 aaPredicted RBP16.19■□□□□ 0.18
CCNL1-219ENST00000477127 APBA2Q99767 749 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
CCNL1-219ENST00000477127 PORCNQ9H237 461 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 LIMCH1Q9UPQ0 1083 aa16.19■□□□□ 0.18
CCNL1-219ENST00000477127 CEP290O15078 2479 aa16.18■□□□□ 0.18
CCNL1-219ENST00000477127 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-219ENST00000477127 CACNB2Q08289 660 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-219ENST00000477127 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
CCNL1-219ENST00000477127 SHROOM1Q2M3G4 852 aaPredicted RBP16.18■□□□□ 0.18
CCNL1-219ENST00000477127 GPR153Q6NV75 609 aa16.18■□□□□ 0.18
CCNL1-219ENST00000477127 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
CCNL1-219ENST00000477127 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
CCNL1-219ENST00000477127 RANBP2P49792 3224 aaKnown RBP16.17■□□□□ 0.18
CCNL1-219ENST00000477127 TSGA10IPQ3SY00 556 aa16.17■□□□□ 0.18
CCNL1-219ENST00000477127 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
CCNL1-219ENST00000477127 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
CCNL1-219ENST00000477127 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
CCNL1-219ENST00000477127 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
CCNL1-219ENST00000477127 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
CCNL1-219ENST00000477127 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
CCNL1-219ENST00000477127 TRIOBPQ9H2D6 2365 aa16.17■□□□□ 0.18
CCNL1-219ENST00000477127 CDK5RAP2Q96SN8 1893 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms