RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 DLC1Q96QB1 1528 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 MBD5Q9P267 1494 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 IFIT2P09913 472 aaKnown RBP8.6□□□□□ -1.03
LRCH3-215ENST00000476664 U2AF1L5P0DN76 240 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-215ENST00000476664 CCNFP41002 786 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 GRIA4P48058 902 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 PURAQ00577 322 aaKnown RBP8.6□□□□□ -1.03
LRCH3-215ENST00000476664 U2AF1Q01081 240 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRCH3-215ENST00000476664 SLC10A6Q3KNW5 377 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 NCAPG2Q86XI2 1143 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 TAB3Q8N5C8 712 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-215ENST00000476664 MAGEB6Q8N7X4 407 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 HOOK2Q96ED9 719 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 AGBL1Q96MI9 1066 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 ZIC5Q96T25 663 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 CDC6Q99741 560 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 CASZ1Q86V15 1759 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 PLEKHG1Q9ULL1 1385 aa8.6□□□□□ -1.03
LRCH3-215ENST00000476664 ZNF644Q9H582 1327 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 SUSD5O60279 629 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 RFPL1O75677 317 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 ATP4AP20648 1035 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 IDI1Q13907 227 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 GRAMD1BQ3KR37 738 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 KRBA2Q6ZNG9 492 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 PCGF5Q86SE9 256 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 KISS1RQ969F8 398 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 DHRS4Q9BTZ2 278 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 PUS7LQ9H0K6 701 aaKnown RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
LRCH3-215ENST00000476664 ZNF180Q9UJW8 692 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 INTUQ9ULD6 942 aa8.59□□□□□ -1.03
LRCH3-215ENST00000476664 BRINP1O60477 761 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 NPTXRO95502 500 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 APBA3O96018 575 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 GGCXP38435 758 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 PHKA2P46019 1235 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-215ENST00000476664 LMOD3Q0VAK6 560 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 NNTQ13423 1086 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 AMOTL1Q8IY63 956 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-215ENST00000476664 E2F7Q96AV8 911 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 BHLHE41Q9C0J9 482 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-215ENST00000476664 ZNF576Q9H609 170 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 DACH1Q9UI36 760 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-215ENST00000476664 TRPM2O94759 1503 aa8.58□□□□□ -1.04
LRCH3-215ENST00000476664 A0A096LPE4 126 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 A0A1W2PPZ6 126 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 GPR39O43194 453 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 KIF4AO95239 1232 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 NBPF7P0C2Y1 421 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 PTMSP20962 102 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 BDNFP23560 247 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 L1CAMP32004 1257 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 RPL6Q02878 288 aaKnown RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 HYAL2Q12891 473 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 STRN3Q13033 797 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 GPR162Q16538 588 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
LRCH3-215ENST00000476664 SPATS2Q86XZ4 545 aaKnown RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 DDX1Q92499 740 aaKnown RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 RTFDC1Q9BY42 306 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 NOB1Q9ULX3 412 aaKnown RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 MRPS23Q9Y3D9 190 aaKnown RBP8.57□□□□□ -1.04
LRCH3-215ENST00000476664 TNS2Q63HR2 1409 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-215ENST00000476664 TBX3O15119 743 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 SASH3O75995 380 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 NME2P22392 152 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 DHCR24Q15392 516 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 INO80DQ53TQ3 878 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-215ENST00000476664 SCARA3Q6AZY7 606 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 CXorf57Q6NSI4 855 aaKnown RBP8.56□□□□□ -1.04
LRCH3-215ENST00000476664 LLGL2Q6P1M3 1020 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 TMEM40Q8WWA1 233 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 EXOC2Q96KP1 924 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 YIPF4Q9BSR8 244 aa8.56□□□□□ -1.04
LRCH3-215ENST00000476664 PDGFDQ9GZP0 370 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-215ENST00000476664 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms